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SLC27A2 solute carrier family 27 member 2 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100968109, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A2
Gene description
solute carrier family 27 member 2
See related
Ensembl:ENSPPAG00000043038
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 16 NC_073265.2 (39422327..39474538)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 15 NC_073264.1 (43606084..43658662)

Chromosome 16 - NC_073265.2Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 227 member B Neighboring gene DTW domain containing 1 Neighboring gene ATPase phospholipid transporting 8B4 (putative) Neighboring gene U6 spliceosomal RNA Neighboring gene GA binding protein transcription factor subunit beta 1 Neighboring gene histidine decarboxylase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phytanate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pristanate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into cell IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain fatty acid transport protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073265.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    39422327..39474538
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003831503.5 → XP_003831551.1  long-chain fatty acid transport protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2R9CIF1
    Related
    ENSPPAP00000040803.1
    Conserved Domains (2) summary
    cd05938
    Location:76 → 610
    hsFATP2a_ACSVL_like; Fatty acid transport proteins (FATP) including hsFATP2, hsFATP5, and hsFATP6, and similar proteins
    PRK08279
    Location:30 → 620
    PRK08279; long-chain-acyl-CoA synthetase; Validated

  2. XM_003831504.5 → XP_003831552.1  long-chain fatty acid transport protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2R9CFT6
    Related
    ENSPPAP00000040805.1
    Conserved Domains (2) summary
    PRK08279
    Location:30 → 567
    PRK08279; long-chain-acyl-CoA synthetase; Validated
    cl17068
    Location:76 → 557
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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