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ATG10 autophagy related 10 [ Otolemur garnettii (small-eared galago) ]

Gene ID: 100960560, updated on 8-Mar-2024

Summary

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Gene symbol
ATG10
Gene description
autophagy related 10
See related
Ensembl:ENSOGAG00000008161
Gene type
protein coding
RefSeq status
MODEL
Organism
Otolemur garnettii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lorisiformes; Galagidae; Otolemur
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OtoGar3 (GCF_000181295.1) Unplaced Scaffold NW_003852412.1 (15888047..16150950)

NW_003852412.1Genomic Context describing neighboring genes Neighboring gene single stranded DNA binding protein 2 Neighboring gene uncharacterized LOC111723929 Neighboring gene U1 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene 40S ribosomal protein S29 pseudogene Neighboring gene ATPase H+ transporting accessory protein 1 like Neighboring gene ribosomal protein S23

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003852412 Unplaced Scaffold Reference OtoGar3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Atg12 transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification by small protein conjugation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin-like-conjugating enzyme ATG10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Otolemur garnettii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OtoGar3

Genomic

  1. NW_003852412.1 Reference OtoGar3

    Range
    15888047..16150950
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003786018.3 → XP_003786066.1  ubiquitin-like-conjugating enzyme ATG10

    UniProtKB/TrEMBL
    H0WXV0
    Related
    ENSOGAP00000007305.2, ENSOGAT00000008165.2
    Conserved Domains (1) summary
    pfam03987
    Location:101 → 168
    Autophagy_act_C; Autophagocytosis associated protein, active-site domain
Nucleotide Protein
Heading Accession and Version

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