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FOXP1 forkhead box P1 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100933553, updated on 8-Mar-2024

Summary

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Gene symbol
FOXP1
Gene description
forkhead box P1
See related
Ensembl:ENSSHAG00000026979
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
20
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 1 NC_045426.1 (33177932..33553658, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 2 Unlocalized Scaffold NW_003823599.1 (4147469..4469851, complement)

Chromosome 1 - NC_045426.1Genomic Context describing neighboring genes Neighboring gene MyoD family inhibitor domain containing 2 Neighboring gene uncharacterized LOC105749579 Neighboring gene sulfated surface glycoprotein 185-like Neighboring gene eukaryotic translation initiation factor 4E family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein P1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045426.1 Reference mSarHar1.11 Primary Assembly

    Range
    33177932..33553658 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031945438.1 → XP_031801298.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PBJ6, A0A7N4PXA2
    Conserved Domains (2) summary
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  2. XM_031945560.1 → XP_031801420.1  forkhead box protein P1 isoform X3

    UniProtKB/TrEMBL
    A0A7N4PBJ6
    Conserved Domains (2) summary
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:463 → 544
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  3. XM_031945495.1 → XP_031801355.1  forkhead box protein P1 isoform X2

    UniProtKB/TrEMBL
    A0A7N4PBJ6
    Related
    ENSSHAP00000034599.1, ENSSHAT00000034130.1
    Conserved Domains (2) summary
    pfam16159
    Location:301 → 368
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:463 → 544
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  4. XM_031945376.1 → XP_031801236.1  forkhead box protein P1 isoform X1

    UniProtKB/TrEMBL
    A0A7N4PBJ6, A0A7N4PXA2
    Related
    ENSSHAP00000043431.1, ENSSHAT00000041740.1
    Conserved Domains (2) summary
    pfam16159
    Location:302 → 369
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:464 → 545
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  5. XM_031945618.1 → XP_031801478.1  forkhead box protein P1 isoform X4

    UniProtKB/TrEMBL
    A0A7N4PBJ6
    Conserved Domains (2) summary
    pfam16159
    Location:271 → 338
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:433 → 514
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  6. XM_023498118.2 → XP_023353886.2  forkhead box protein P1 isoform X5

    UniProtKB/TrEMBL
    A0A7N4P4A6
    Related
    ENSSHAP00000032770.1, ENSSHAT00000036492.1
    Conserved Domains (2) summary
    pfam16159
    Location:207 → 274
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:369 → 450
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)

  7. XM_023498117.2 → XP_023353885.2  forkhead box protein P1 isoform X5

    UniProtKB/TrEMBL
    A0A7N4P4A6
    Conserved Domains (2) summary
    pfam16159
    Location:207 → 274
    FOXP-CC; FOXP coiled-coil domain
    cd20065
    Location:369 → 450
    FH_FOXP2; Forkhead (FH) domain found in Forkhead box protein P2 (FOXP2)
Nucleotide Protein
Heading Accession and Version

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