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PLXNA3 plexin A3 [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 100925646, updated on 8-Mar-2024

Summary

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Gene symbol
PLXNA3
Gene description
plexin A3
See related
Ensembl:ENSSHAG00000006328
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See PLXNA3 in Genome Data Viewer
Location:
chromosome: X
Exon count:
33
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) X NC_045432.1 (5388017..5416145)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) X Unlocalized Scaffold NW_003849579.1 (221053..246331)

Chromosome X - NC_045432.1Genomic Context describing neighboring genes Neighboring gene GDP dissociation inhibitor 1 Neighboring gene family with sequence similarity 50 member A Neighboring gene ubiquitin like 4A Neighboring gene solute carrier family 10 member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell shape IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of semaphorin receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plexin-A3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045432.1 Reference mSarHar1.11 Primary Assembly

    Range
    5388017..5416145
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031945197.1 → XP_031801057.1  plexin-A3

    UniProtKB/TrEMBL
    A0A7N4NKZ4, G3VVS5
    Related
    ENSSHAP00000007280.2, ENSSHAT00000007342.2
    Conserved Domains (10) summary
    smart00423
    Location:949 → 990
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd00603
    Location:1296 → 1361
    IPT_PCSR; IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins . This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the ...
    cd01179
    Location:1096 → 1182
    IPT_plexin_repeat2; Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01180
    Location:1001 → 1095
    IPT_plexin_repeat1; First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    cd01181
    Location:1184 → 1284
    IPT_plexin_repeat3; Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR) . Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present ...
    pfam01437
    Location:651 → 693
    PSI; Plexin repeat
    pfam08337
    Location:1455 → 2002
    Plexin_cytopl; Plexin cytoplasmic RasGAP domain
    pfam17960
    Location:706 → 797
    TIG_plexin; TIG domain
    pfam18020
    Location:851 → 945
    TIG_2; TIG domain found in plexin
    cl15693
    Location:183 → 650
    Sema; The Sema domain, a protein interacting module, of semaphorins and plexins
Nucleotide Protein
Heading Accession and Version

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