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Mecom MDS1 and EVI1 complex locus [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768628, updated on 8-Mar-2024

Summary

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Gene symbol
Mecom
Gene description
MDS1 and EVI1 complex locus
Locus tag
I79_010314
See related
Ensembl:ENSCGRG00015027318
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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See Mecom in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613976.1 (1360311..1404292)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (118558823..118603026, complement)

NW_003613976.1Genomic Context describing neighboring genes Neighboring gene transfer RNA valine (anticodon AAC) Neighboring gene actin related protein T3 Neighboring gene uncharacterized LOC113832956

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase MECOM
Names
Ecotropic virus integration site 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613976.1 Reference CriGri_1.0 Primary Assembly

    Range
    1360311..1404292
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035456578.1 → XP_035312469.1  histone-lysine N-methyltransferase MECOM isoform X2

    UniProtKB/TrEMBL
    A0A8C2LWT3
    Conserved Domains (4) summary
    PHA00733
    Location:690 → 786
    PHA00733; hypothetical protein
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:734 → 756
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:748 → 772
    zf-H2C2_2; Zinc-finger double domain

  2. XM_035456580.1 → XP_035312471.1  histone-lysine N-methyltransferase MECOM isoform X4

    UniProtKB/TrEMBL
    A0A8C2LWT3
    Conserved Domains (4) summary
    PHA00733
    Location:658 → 777
    PHA00733; hypothetical protein
    sd00017
    Location:727 → 747
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:725 → 747
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:739 → 763
    zf-H2C2_2; Zinc-finger double domain

  3. XM_035456579.1 → XP_035312470.1  histone-lysine N-methyltransferase MECOM isoform X3

    UniProtKB/TrEMBL
    A0A8C2LWT3, A0A8C2LYR2
    Conserved Domains (5) summary
    PHA00733
    Location:689 → 785
    PHA00733; hypothetical protein
    sd00017
    Location:735 → 755
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:733 → 755
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:747 → 771
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:136 → 178
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

  4. XM_035456577.1 → XP_035312468.1  histone-lysine N-methyltransferase MECOM isoform X1

    UniProtKB/TrEMBL
    A0A8C2LW97, A0A8C2LWT3
    Conserved Domains (5) summary
    PHA00733
    Location:657 → 776
    PHA00733; hypothetical protein
    sd00017
    Location:726 → 746
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:724 → 746
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:738 → 762
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:136 → 178
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

  5. XM_035456581.1 → XP_035312472.1  histone-lysine N-methyltransferase MECOM isoform X5

    UniProtKB/TrEMBL
    A0A8C2QGA1
    Conserved Domains (6) summary
    PHA00733
    Location:333 → 452
    PHA00733; hypothetical protein
    COG5048
    Location:101 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:402 → 422
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:457 → 479
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:414 → 438
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:77 → 123
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    118558823..118603026 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035451147.1 → XP_035307038.1  histone-lysine N-methyltransferase MECOM isoform X5

    UniProtKB/TrEMBL
    A0A8C2QGA1, A0A9J7KAU8
    Conserved Domains (6) summary
    PHA00733
    Location:333 → 452
    PHA00733; hypothetical protein
    COG5048
    Location:101 → 443
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:402 → 422
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:457 → 479
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:414 → 438
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:77 → 123
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

  2. XM_035451143.1 → XP_035307034.1  histone-lysine N-methyltransferase MECOM isoform X1

    UniProtKB/TrEMBL
    A0A8C2LWT3, A0A9J7HAN7
    Conserved Domains (5) summary
    PHA00733
    Location:657 → 776
    PHA00733; hypothetical protein
    sd00017
    Location:726 → 746
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:724 → 746
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:738 → 762
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:136 → 178
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

  3. XM_035451145.1 → XP_035307036.1  histone-lysine N-methyltransferase MECOM isoform X3

    UniProtKB/TrEMBL
    A0A8C2LWT3, A0A9J7HCN2
    Related
    ENSCGRP00015036434.2, ENSCGRT00015044418.2
    Conserved Domains (5) summary
    PHA00733
    Location:689 → 785
    PHA00733; hypothetical protein
    sd00017
    Location:735 → 755
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:733 → 755
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:747 → 771
    zf-H2C2_2; Zinc-finger double domain
    cd20908
    Location:136 → 178
    SUF4-like; N-terminal domain of Oryza sativa transcription factor SUPPRESSOR OF FRI 4 (OsSUF4), Arabidopsis thaliana SUF4 (AtSUF4), and similar proteins

  4. XM_035451146.1 → XP_035307037.1  histone-lysine N-methyltransferase MECOM isoform X4

    UniProtKB/TrEMBL
    A0A8C2LWT3, A0A9J7H995
    Conserved Domains (4) summary
    PHA00733
    Location:658 → 777
    PHA00733; hypothetical protein
    sd00017
    Location:727 → 747
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:725 → 747
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:739 → 763
    zf-H2C2_2; Zinc-finger double domain

  5. XM_035451144.1 → XP_035307035.1  histone-lysine N-methyltransferase MECOM isoform X2

    UniProtKB/TrEMBL
    A0A8C2LWT3, A0A9J7H8I9
    Conserved Domains (4) summary
    PHA00733
    Location:690 → 786
    PHA00733; hypothetical protein
    sd00017
    Location:736 → 756
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:734 → 756
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:748 → 772
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein Strain
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