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RND1 Rho family GTPase 1 [ Sus scrofa (pig) ]

Gene ID: 100737739, updated on 8-Mar-2024

Summary

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Official Symbol
RND1provided by VGNC
Official Full Name
Rho family GTPase 1provided by VGNC
Primary source
VGNC:VGNC:92343
See related
Ensembl:ENSSSCG00000038562
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Broad expression in ovary (RPKM 10.0), liver (RPKM 5.7) and 5 other tissues See more
Orthologs
human mouse all
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Genomic context

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See RND1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 5 NC_010447.5 (14914652..14922032, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 5 NC_010447.4 (15325808..15333219, complement)

Chromosome 5 - NC_010447.5Genomic Context describing neighboring genes Neighboring gene calcium voltage-gated channel auxiliary subunit beta 3 Neighboring gene DEAD-box helicase 23 Neighboring gene coiled-coil domain containing 65 Neighboring gene FKBP prolyl isomerase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho-related GTP-binding protein Rho6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010447.5 Reference Sscrofa11.1 Primary Assembly

    Range
    14914652..14922032 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003481567.4 → XP_003481615.1  rho-related GTP-binding protein Rho6

    UniProtKB/TrEMBL
    A0A287BS61, A0A4X1WCY9, A0A8D1S462, A0A8D2BG69
    Related
    ENSSSCP00000059270.2, ENSSSCT00000062176.3
    Conserved Domains (2) summary
    smart00174
    Location:16 → 189
    RHO; Rho (Ras homology) subfamily of Ras-like small GTPases
    cl21455
    Location:1 → 232
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
Heading Accession and Version

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