Cope COPI coat complex subunit epsilon [Cricetulus griseus (Chinese hamster)] - Gene

Summary

Gene symbol: Cope
Gene description: COPI coat complex subunit epsilon
See related: Ensembl:ENSCGRG00015026059
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Cricetulus griseus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as: LDLF
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 1

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
104	current	CriGri_1.0 (GCF_000223135.1)	Unplaced Scaffold	NW_003613716.1 (627242..638215)
104	current	CriGri-PICRH-1.0 (GCF_003668045.3)	1 Unlocalized Scaffold	NW_023276806.1 (248658337..248669240, complement)

NW_003613716.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed
enables structural molecule activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in intra-Golgi vesicle-mediated transport	IEA Inferred from Electronic Annotation more info	PubMed
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of COPI vesicle coat	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: coatomer subunit epsilon

Names: Epsilon-coat protein; coatomer protein complex subunit epsilon; epsilon-COP

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001246677.1 → NP_001233606.1 coatomer subunit epsilon

See identical proteins and their annotated locations for NP_001233606.1

Status: PROVISIONAL

Source sequence(s)

Z32554

UniProtKB/Swiss-Prot

Q60445

UniProtKB/TrEMBL

A0A061INV0, G3H485

Related

ENSCGRP00015034679.2, ENSCGRT00015042277.2

Conserved Domains (2) summary

pfam04733
Location:17 → 305

Coatomer_E; Coatomer epsilon subunit

sd00006
Location:185 → 210

TPR; TPR repeat [structural motif]

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

NW_003613716.1 Reference CriGri_1.0 Primary Assembly

Range

627242..638215

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_035450945.1 → XP_035306836.1 coatomer subunit epsilon isoform X1

UniProtKB/TrEMBL

A0A061IQC4

Conserved Domains (2) summary

sd00004
Location:153 → 175

PPR; PPR repeat [structural motif]

pfam04733
Location:17 → 282

Coatomer_E; Coatomer epsilon subunit