U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Srrt serrate, RNA effector molecule [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689205, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Srrt
Gene description
serrate, RNA effector molecule
Locus tag
I79_023004
See related
Ensembl:ENSCGRG00015009421
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
ARS2; Asr2
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Srrt in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616206.1 (73127..84458)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (116210120..116222012, complement)

NW_003616206.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 12 member 9 Neighboring gene thyroid hormone receptor interactor 6 Neighboring gene UFM1 specific peptidase 1 (inactive) Neighboring gene acetylcholinesterase (Cartwright blood group)

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Expression cloning for arsenite-resistance resulted in isolation of tumor-suppressor fau cDNA: possible involvement of the ubiquitin system in arsenic carcinogenesis. Rossman TG, et al. Carcinogenesis, 1999 Feb. PMID 10069470
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in primary miRNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serrate RNA effector molecule homolog
Names
Arsenite-resistance protein 2
Serrate RNA effector molecule-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616206.1 Reference CriGri_1.0 Primary Assembly

    Range
    73127..84458
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035437576.1 → XP_035293467.1  serrate RNA effector molecule homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C2QCB9, A0A9J7GVL1
    Conserved Domains (2) summary
    pfam04959
    Location:647 → 848
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    116210120..116222012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443403.1 → XP_035299294.1  serrate RNA effector molecule homolog isoform X5

    UniProtKB/TrEMBL
    A0A8C2QCB9, A0A9J7GTW3
    Conserved Domains (2) summary
    pfam04959
    Location:647 → 841
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  2. XM_035443401.1 → XP_035299292.1  serrate RNA effector molecule homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C2QCB9, A0A9J7GVL1
    Conserved Domains (2) summary
    pfam04959
    Location:647 → 848
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  3. XM_035443402.1 → XP_035299293.1  serrate RNA effector molecule homolog isoform X4

    UniProtKB/TrEMBL
    A0A8C2QCB9, A0A9J7GUU7
    Conserved Domains (2) summary
    pfam04959
    Location:647 → 845
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

  4. XM_035443400.1 → XP_035299291.1  serrate RNA effector molecule homolog isoform X2

    UniProtKB/TrEMBL
    A0A8C2LH14, A0A8C2QCB9
    Related
    ENSCGRP00015012397.1, ENSCGRT00015015187.2
    Conserved Domains (2) summary
    pfam04959
    Location:647 → 852
    ARS2; Arsenite-resistance protein 2
    pfam12066
    Location:153 → 262
    DUF3546; Domain of unknown function (DUF3546)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001246719.1: Suppressed sequence

    Description
    NM_001246719.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: SRRT (GeneID:51593).
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q60436.3 GenPept UniProtKB/Swiss-Prot:Q60436

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.