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IGBP1 immunoglobulin binding protein 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100666546, updated on 11-Apr-2024

Summary

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Gene symbol
IGBP1
Gene description
immunoglobulin binding protein 1
See related
EnsemblRapid:ENSLAFG00000016191
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) X NC_087369.1 (79218979..79275779)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573444.1 (32695451..32752309, complement)

Chromosome X - NC_087369.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA wax alcohol acyltransferase 2 Neighboring gene OTU deubiquitinase 6A Neighboring gene diacylglycerol O-acyltransferase 2 like 6 Neighboring gene acyl-CoA wax alcohol acyltransferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein phosphatase 2A binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin-binding protein 1
Names
immunoglobulin (CD79A) binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087369.1 Reference mLoxAfr1.hap2

    Range
    79218979..79275779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064278510.1 → XP_064134580.1  immunoglobulin-binding protein 1 isoform X2

  2. XM_064278509.1 → XP_064134579.1  immunoglobulin-binding protein 1 isoform X1

  3. XM_010592733.3 → XP_010591035.1  immunoglobulin-binding protein 1 isoform X4

    Conserved Domains (1) summary
    pfam04177
    Location:17 → 328
    TAP42; TAP42-like family

  4. XM_003412738.4 → XP_003412786.1  immunoglobulin-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    G3TGI2
    Related
    ENSLAFP00000013589.3, ENSLAFT00000016189.4
    Conserved Domains (1) summary
    pfam04177
    Location:17 → 329
    TAP42; TAP42-like family
Nucleotide Protein
Heading Accession and Version

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