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TAF3 TATA-box binding protein associated factor 3 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100655444, updated on 11-Apr-2024

Summary

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Gene symbol
TAF3
Gene description
TATA-box binding protein associated factor 3
See related
EnsemblRapid:ENSLAFG00000001915
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See TAF3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 4 NC_087345.1 (146849584..147095518)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573435.1 (38258379..38499967, complement)

Chromosome 4 - NC_087345.1Genomic Context describing neighboring genes Neighboring gene Kin17 DNA and RNA binding protein Neighboring gene ATP synthase F1 subunit gamma Neighboring gene uncharacterized LOC111750854 Neighboring gene uncharacterized LOC135231269 Neighboring gene uncharacterized LOC135231270 Neighboring gene GATA binding protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables p53 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087345.1 Reference mLoxAfr1.hap2

    Range
    146849584..147095518
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003410589.4 → XP_003410637.1  transcription initiation factor TFIID subunit 3 isoform X1

    UniProtKB/TrEMBL
    G3SPH0
    Related
    ENSLAFP00000001600.3, ENSLAFT00000001914.4
    Conserved Domains (2) summary
    smart00576
    Location:5 → 79
    BTP; Bromodomain transcription factors and PHD domain containing proteins
    cd15522
    Location:868 → 913
    PHD_TAF3; PHD finger found in transcription initiation factor TFIID subunit 3 (TAF3)

  2. XM_023548937.2 → XP_023404705.1  transcription initiation factor TFIID subunit 3 isoform X3

    Conserved Domains (1) summary
    smart00576
    Location:5 → 79
    BTP; Bromodomain transcription factors and PHD domain containing proteins

  3. XM_064284839.1 → XP_064140909.1  transcription initiation factor TFIID subunit 3 isoform X2

Nucleotide Protein
Heading Accession and Version

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