U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

IFT25 intraflagellar transport 25 [ Equus caballus (horse) ]

Gene ID: 100629783, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
IFT25provided by VGNC
Official Full Name
intraflagellar transport 25provided by VGNC
Primary source
VGNC:VGNC:50706
See related
Ensembl:ENSECAG00000010446
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
HSPB11
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See IFT25 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (5525389..5552963)
102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (5511714..5539034)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene low density lipoprotein receptor class A domain containing 1 Neighboring gene leucine rich repeat containing 42 Neighboring gene iodothyronine deiodinase 1 Neighboring gene Yip1 domain family member 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intraciliary transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of intraciliary transport particle B IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
intraflagellar transport protein 25 homolog
Names
heat shock protein family B (small) member 11
heat shock protein family B (small), member 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    5525389..5552963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023629601.1 → XP_023485369.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  2. XM_023629621.1 → XP_023485389.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  3. XM_023629650.1 → XP_023485418.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  4. XM_023629631.1 → XP_023485399.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  5. XM_023629612.1 → XP_023485380.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Related
    ENSECAP00000057459.1, ENSECAT00000140951.1
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  6. XM_023629638.1 → XP_023485406.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  7. XM_023629641.1 → XP_023485409.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  8. XM_023629658.1 → XP_023485426.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  9. XM_023629654.1 → XP_023485422.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  10. XM_023629653.1 → XP_023485421.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  11. XM_023629591.1 → XP_023485359.1  intraflagellar transport protein 25 homolog isoform X1

    Conserved Domains (1) summary
    pfam00754
    Location:40 → 146
    F5_F8_type_C; F5/8 type C domain

  12. XM_014737443.2 → XP_014592929.1  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain

  13. XM_014737441.2 → XP_014592927.2  intraflagellar transport protein 25 homolog isoform X2

    UniProtKB/TrEMBL
    A0A9L0R4S0
    Conserved Domains (1) summary
    pfam00754
    Location:19 → 125
    F5_F8_type_C; F5/8 type C domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.