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TPM4 tropomyosin 4 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100617065, updated on 8-May-2024

Summary

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Gene symbol
TPM4
Gene description
tropomyosin 4
See related
EnsemblRapid:ENSMODG00000014882
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (82527738..82574743, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (479215181..479261337)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene hematopoietic SH2 domain containing Neighboring gene actin, cytoplasmic 1-like Neighboring gene RAB8A, member RAS oncogene family Neighboring gene uncharacterized LOC103098154 Neighboring gene olfactory receptor 1361 Neighboring gene olfactory receptor 1361

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in actin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tropomyosin alpha-4 chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    82527738..82574743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003340769.4 → XP_003340817.1  tropomyosin alpha-4 chain isoform X1

    See identical proteins and their annotated locations for XP_003340817.1

    Related
    ENSMODP00000060213.2, ENSMODT00000074638.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 282
    Tropomyosin

  2. XM_003340770.4 → XP_003340818.1  tropomyosin alpha-4 chain isoform X3

    UniProtKB/TrEMBL
    F7GGJ7
    Related
    ENSMODP00000018612.2, ENSMODT00000018947.4
    Conserved Domains (1) summary
    pfam00261
    Location:12 → 246
    Tropomyosin

  3. XM_003340772.4 → XP_003340820.1  tropomyosin alpha-4 chain isoform X4

    Conserved Domains (1) summary
    pfam00261
    Location:12 → 246
    Tropomyosin

  4. XM_003340771.4 → XP_003340819.1  tropomyosin alpha-4 chain isoform X2

    See identical proteins and their annotated locations for XP_003340819.1

    Related
    ENSMODP00000047720.2, ENSMODT00000079917.2
    Conserved Domains (1) summary
    pfam00261
    Location:48 → 282
    Tropomyosin
Nucleotide Protein
Heading Accession and Version

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