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SSRP1 structure specific recognition protein 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100607407, updated on 8-Mar-2024

Summary

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Gene symbol
SSRP1
Gene description
structure specific recognition protein 1
See related
EnsemblRapid:ENSNLEG00000012584
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SSRP1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 4 NC_044384.1 (76739602..76749502, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 4 NC_019819.1 (77693780..77703681, complement)

Chromosome 4 - NC_044384.1Genomic Context describing neighboring genes Neighboring gene apelin receptor Neighboring gene tankyrase 1 binding protein 1 Neighboring gene small nucleolar RNA U13 Neighboring gene purinergic receptor P2X 3 Neighboring gene proteoglycan 3, pro eosinophil major basic protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of FACT complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FACT complex subunit SSRP1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044384.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    76739602..76749502 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003275300.3 → XP_003275348.1  FACT complex subunit SSRP1

    UniProtKB/TrEMBL
    A0A2I3HTQ7, G1RPY1
    Related
    ENSNLEP00000015295.1, ENSNLET00000016071.4
    Conserved Domains (2) summary
    COG5165
    Location:21 → 480
    POB3; Nucleosome-binding factor SPN, POB3 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
    pfam00505
    Location:547 → 614
    HMG_box; HMG (high mobility group) box
Nucleotide Protein
Heading Accession and Version

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