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TSHZ2 teashirt zinc finger homeobox 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100601981, updated on 8-Mar-2024

Summary

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Gene symbol
TSHZ2
Gene description
teashirt zinc finger homeobox 2
See related
EnsemblRapid:ENSNLEG00000007016
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
4
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 13 NC_044393.1 (10603918..11122758, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 13 NC_019828.1 (11045609..11603164, complement)

Chromosome 13 - NC_044393.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC115838000 Neighboring gene zinc finger protein 217 Neighboring gene uncharacterized LOC105740717 Neighboring gene uncharacterized LOC105740680 Neighboring gene endoplasmic reticulum resident protein 29-like Neighboring gene ZFP64 zinc finger protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
teashirt homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044393.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    10603918..11122758 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003252945.4 → XP_003252993.1  teashirt homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3HYS9, G1R5T2
    Related
    ENSNLEP00000008554.2, ENSNLET00000008958.3
    Conserved Domains (3) summary
    cd00086
    Location:842 → 910
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:217 → 239
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam11489
    Location:433 → 674
    Aim21; Altered inheritance of mitochondria protein 21

  2. XM_003252946.4 → XP_003252994.1  teashirt homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3HXZ5, A0A2I3HYS9
    Conserved Domains (3) summary
    cd00086
    Location:839 → 907
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:214 → 236
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam11489
    Location:430 → 671
    Aim21; Altered inheritance of mitochondria protein 21
Nucleotide Protein
Heading Accession and Version

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