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PAK1 p21 (RAC1) activated kinase 1 [ Sus scrofa (pig) ]

Gene ID: 100525766, updated on 8-Mar-2024

Summary

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Gene symbol
PAK1
Gene description
p21 (RAC1) activated kinase 1
See related
Ensembl:ENSSSCG00000014878
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in kidney (RPKM 39.9), psoas major muscle (RPKM 23.4) and 7 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
19
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (11830095..11973074, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (12979543..13123587, complement)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene rho GTPase-activating protein 21 pseudogene Neighboring gene glycerophosphodiester phosphodiesterase domain-containing protein 4 Neighboring gene RING finger protein 11 pseudogene Neighboring gene DDB1- and CUL4-associated factor 16-like Neighboring gene uncharacterized LOC106504821

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PAK1 Is Involved in the Spindle Assembly during the First Meiotic Division in Porcine Oocytes. Peng L, et al. Int J Mol Sci, 2023 Jan 6. PMID 36674642, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. PAK1 Is Involved in the Spindle Assembly during the First Meiotic Division in Porcine Oocytes.
    Title: PAK1 Is Involved in the Spindle Assembly during the First Meiotic Division in Porcine Oocytes.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase PAK 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    11830095..11973074 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005667164.3 → XP_005667221.2  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  2. XM_013979177.2 → XP_013834631.2  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  3. XM_021062558.1 → XP_020918217.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  4. XM_013979173.2 → XP_013834627.2  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  5. XM_013979175.2 → XP_013834629.2  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  6. XM_013979174.2 → XP_013834628.2  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  7. XM_021062559.1 → XP_020918218.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  8. XM_021062561.1 → XP_020918220.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Related
    ENSSSCP00000066687.2, ENSSSCT00000081433.2
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1

  9. XM_021062560.1 → XP_020918219.1  serine/threonine-protein kinase PAK 1

    UniProtKB/TrEMBL
    A0A5G2QY88, A0A8D0TGD0, A0A8D1CIN6
    Conserved Domains (1) summary
    cd06654
    Location:150 → 445
    STKc_PAK1; Catalytic domain of the Serine/Threonine Kinase, p21-activated kinase 1
Nucleotide Protein
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