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LACTB2 lactamase beta 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100469079, updated on 8-Mar-2024

Summary

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Gene symbol
LACTB2
Gene description
lactamase beta 2
Locus tag
PANDA_007025
See related
Ensembl:ENSAMEG00000006360
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 9 NC_048226.1 (43343020..43367646, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217553.1 (1459139..1483860, complement)

Chromosome 9 - NC_048226.1Genomic Context describing neighboring genes Neighboring gene spermine synthase-like Neighboring gene 40S ribosomal protein S8-like Neighboring gene translocation associated membrane protein 1 Neighboring gene XK related 9 Neighboring gene mitochondrial import inner membrane translocase subunit TIM14-like Neighboring gene 60S ribosomal protein L30-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endoribonuclease LACTB2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048226.1 Reference ASM200744v2 Primary Assembly

    Range
    43343020..43367646 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034668176.1 → XP_034524067.1  endoribonuclease LACTB2 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JXQ8, D2H9L7
    Related
    ENSAMEP00000031823.1, ENSAMET00000031318.1

  2. XM_002918507.4 → XP_002918553.1  endoribonuclease LACTB2 isoform X2

    UniProtKB/TrEMBL
    D2H9L7, G1LIE5
    Related
    ENSAMEP00000006697.2, ENSAMET00000006980.2
    Conserved Domains (2) summary
    COG0491
    Location:23 → 217
    GloB; Glyoxylase or a related metal-dependent hydrolase, beta-lactamase superfamily II [General function prediction only]
    cd07722
    Location:14 → 203
    LACTB2-like_MBL-fold; uncharacterized subgroup which includes human lactamase beta 2 and related proteins; MBL-fold metallo hydrolase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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