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THOC5 THO complex subunit 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100465138, updated on 8-Mar-2024

Summary

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Gene symbol
THOC5
Gene description
THO complex subunit 5
Locus tag
PANDA_003645
See related
Ensembl:ENSAMEG00000008176
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
24
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 12 NC_048229.1 (20101480..20135876)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217387.1 (2104879..2140071)

Chromosome 12 - NC_048229.1Genomic Context describing neighboring genes Neighboring gene NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor Neighboring gene uncharacterized LOC109489049 Neighboring gene nipsnap homolog 1 Neighboring gene uncharacterized LOC117795282 Neighboring gene neurofilament heavy chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription, elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of THO complex part of transcription export complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
THO complex subunit 5 homolog
Names
THO complex 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048229.1 Reference ASM200744v2 Primary Assembly

    Range
    20101480..20135876
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011220214.3 → XP_011218516.1  THO complex subunit 5 homolog isoform X1

    See identical proteins and their annotated locations for XP_011218516.1

    UniProtKB/TrEMBL
    A0A7N5P252, D2H235
    Related
    ENSAMEP00000024513.1, ENSAMET00000043996.1
    Conserved Domains (1) summary
    pfam09766
    Location:97 → 463
    FimP; Fms-interacting protein

  2. XM_019795680.2 → XP_019651239.1  THO complex subunit 5 homolog isoform X2

    UniProtKB/TrEMBL
    D2H235, G1LNK5
    Related
    ENSAMEP00000008633.1, ENSAMET00000009002.2

  3. XM_011220213.3 → XP_011218515.1  THO complex subunit 5 homolog isoform X1

    See identical proteins and their annotated locations for XP_011218515.1

    UniProtKB/TrEMBL
    A0A7N5P252, D2H235
    Conserved Domains (1) summary
    pfam09766
    Location:97 → 463
    FimP; Fms-interacting protein

  4. XM_034672846.1 → XP_034528737.1  THO complex subunit 5 homolog isoform X1

    UniProtKB/TrEMBL
    A0A7N5P252, D2H235

  5. XM_034672845.1 → XP_034528736.1  THO complex subunit 5 homolog isoform X1

    UniProtKB/TrEMBL
    A0A7N5P252, D2H235
Nucleotide Protein
Heading Accession and Version

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