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NFATC2IP nuclear factor of activated T cells 2 interacting protein [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100453397, updated on 26-Mar-2024

Summary

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Gene symbol
NFATC2IP
Gene description
nuclear factor of activated T cells 2 interacting protein
Locus tag
CR201_G0034355
See related
Ensembl:ENSPPYG00000007222
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See NFATC2IP in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 18 NC_072003.2 (31550601..31566764, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 16 NC_072001.1 (30961398..30977565, complement)

Chromosome 18 - NC_072003.2Genomic Context describing neighboring genes Neighboring gene linker for activation of T cells Neighboring gene SPNS lysolipid transporter 1, lysophospholipid Neighboring gene CD19 molecule Neighboring gene rabaptin, RAB GTPase binding effector protein 2 Neighboring gene ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
NFATC2-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072003.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    31550601..31566764 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054533709.2 → XP_054389684.1  NFATC2-interacting protein isoform X2

  2. XM_002826272.4 → XP_002826318.1  NFATC2-interacting protein isoform X1

    UniProtKB/TrEMBL
    A0A2J8TJN1, A0A6D2X1Q7, H2NQI0
    Related
    ENSPPYP00000008165.2
    Conserved Domains (2) summary
    cl25424
    Location:348 → 417
    TGS; The TGS domain, named after the ThrRS, GTPase, and SpoT/RelA proteins where it occurs, is structurally similar to ubiquitin. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information ...
    cl28408
    Location:265 → 334
    UBQ; Ubiquitin homologues
Nucleotide Protein
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