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DNAJC2 DnaJ heat shock protein family (Hsp40) member C2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100443022, updated on 26-Mar-2024

Summary

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Gene symbol
DNAJC2
Gene description
DnaJ heat shock protein family (Hsp40) member C2
Locus tag
CR201_G0018087
See related
Ensembl:ENSPPYG00000017882
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 6 NC_071991.2 (99991485..100024072, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 7 NC_071992.1 (93814041..93846628, complement)

Chromosome 6 - NC_071991.2Genomic Context describing neighboring genes Neighboring gene N-acyl phosphatidylethanolamine phospholipase D Neighboring gene large ribosomal subunit protein eL19-like Neighboring gene peptidase, mitochondrial processing subunit beta Neighboring gene small ribosomal subunit protein uS14-like Neighboring gene proteasome 26S subunit, ATPase 2 Neighboring gene solute carrier family 26 member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' cotranslational protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of translational fidelity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily C member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071991.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    99991485..100024072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002818317.5 → XP_002818363.2  dnaJ homolog subfamily C member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8VL55, A0A8I5TA73, H2PN44
    Related
    ENSPPYP00000020044.3
    Conserved Domains (3) summary
    cd00167
    Location:553 → 600
    SANT; 'SWI3, ADA2, N-CoR and TFIIIB' DNA-binding domains. Tandem copies of the domain bind telomeric DNA tandem repeatsas part of the capping complex. Binding is sequence dependent for repeats which contain the G/C rich motif [C2-3 A (CA)1-6]. The domain is ...
    pfam16717
    Location:344 → 420
    RAC_head; Ribosome-associated complex head domain
    cl28246
    Location:75 → 368
    DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

  2. XM_054559647.2 → XP_054415622.1  dnaJ homolog subfamily C member 2 isoform X2

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials