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IGSF8 immunoglobulin superfamily member 8 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100441861, updated on 26-Mar-2024

Summary

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Gene symbol
IGSF8
Gene description
immunoglobulin superfamily member 8
Locus tag
CR201_G0019343
See related
Ensembl:ENSPPYG00000000642
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See IGSF8 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (90284647..90292192)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (90284652..90292174)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene ATPase Na+/K+ transporting subunit alpha 4 Neighboring gene ATPase Na+/K+ transporting subunit alpha 2 Neighboring gene potassium inwardly rectifying channel subfamily J member 9 Neighboring gene potassium inwardly rectifying channel subfamily J member 10 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class M

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
immunoglobulin superfamily member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    90284647..90292192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024234890.3 → XP_024090658.1  immunoglobulin superfamily member 8

    UniProtKB/TrEMBL
    A0A2J8VHI0, A0A6D2XG76, H2N555
    Related
    ENSPPYP00000000750.1
    Conserved Domains (2) summary
    pfam07686
    Location:28 → 149
    V-set; Immunoglobulin V-set domain
    cl11960
    Location:318 → 419
    Ig; Immunoglobulin domain

  2. XM_054527056.2 → XP_054383031.1  immunoglobulin superfamily member 8

    UniProtKB/TrEMBL
    A0A2J8VHI0, A0A6D2XG76, H2N555
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials