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SNX33 sorting nexin 33 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100438423, updated on 26-Mar-2024

Summary

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Gene symbol
SNX33
Gene description
sorting nexin 33
Locus tag
CR201_G0028862
See related
Ensembl:ENSPPYG00000006665
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 16 NC_072001.2 (78863189..78873949)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 15 NC_072000.1 (76145495..76156579)

Chromosome 16 - NC_072001.2Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase non-receptor type 9 Neighboring gene small nuclear ribonucleoprotein F-like Neighboring gene snurportin 1 Neighboring gene IMP U3 small nucleolar ribonucleoprotein 3 Neighboring gene chondroitin sulfate proteoglycan 4 Neighboring gene ciliary microtubule associated protein 1C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Clone Names

  • DKFZp469A1713

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cleavage furrow formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cytokinesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plasma membrane tubulation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorting nexin-33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072001.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    78863189..78873949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002825693.6 → XP_002825739.1  sorting nexin-33

    UniProtKB/TrEMBL
    A0A2J8UDU6, H2NNU7, Q5RAJ1
    Related
    ENSPPYP00000007560.3
    Conserved Domains (3) summary
    cd07669
    Location:365 → 571
    BAR_SNX33; The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 33
    cd11896
    Location:4 → 58
    SH3_SNX33; Src Homology 3 domain of Sorting Nexin 33
    cl02563
    Location:230 → 354
    PX_domain; The Phox Homology domain, a phosphoinositide binding module
Nucleotide Protein
Heading Accession and Version

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