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DMRTA2 DMRT like family A2 [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100394865, updated on 8-Mar-2024

Summary

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Gene symbol
DMRTA2
Gene description
DMRT like family A2
See related
Ensembl:ENSCJAG00000021554
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 7 NC_071448.1 (84307830..84313256, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 7 NC_048389.1 (85790402..85796047, complement)

Chromosome 7 - NC_071448.1Genomic Context describing neighboring genes Neighboring gene high mobility group protein B1-like Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene 60S ribosomal protein L7-like Neighboring gene Fas associated factor 1 Neighboring gene 60S ribosomal protein L15-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in germ cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sex differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
doublesex- and mab-3-related transcription factor A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071448.1 Reference mCalJa1.2.pat.X

    Range
    84307830..84313256 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035251412.2 → XP_035107303.1  doublesex- and mab-3-related transcription factor A2

    UniProtKB/TrEMBL
    A0A2R8MD45
    Conserved Domains (3) summary
    cd14418
    Location:311 → 352
    CUE_DMA_DMRTA2; CUE-like DMA domain found in doublesex- and mab-3-related transcription factor A2 (DMRTA2)
    pfam00751
    Location:66 → 112
    DM; DM DNA binding domain
    cl06641
    Location:227 → 296
    Fea1; Low iron-inducible periplasmic protein

  2. XM_002750806.5 → XP_002750852.1  doublesex- and mab-3-related transcription factor A2

    UniProtKB/TrEMBL
    A0A2R8MD45
    Related
    ENSCJAP00000040130.2
    Conserved Domains (3) summary
    cd14418
    Location:311 → 352
    CUE_DMA_DMRTA2; CUE-like DMA domain found in doublesex- and mab-3-related transcription factor A2 (DMRTA2)
    pfam00751
    Location:66 → 112
    DM; DM DNA binding domain
    cl06641
    Location:227 → 296
    Fea1; Low iron-inducible periplasmic protein
Nucleotide Protein
Heading Accession and Version

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