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PRKCE protein kinase C epsilon [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100388620, updated on 6-Jun-2024

Summary

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Gene symbol
PRKCE
Gene description
protein kinase C epsilon
See related
Ensembl:ENSCJAG00000000724
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 14 NC_071455.1 (66434823..66977222, complement)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 14 NC_048396.1 (65395386..65938569, complement)

Chromosome 14 - NC_071455.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118147338 Neighboring gene endothelial PAS domain protein 1 Neighboring gene ras-related protein Rab-5C-like Neighboring gene uncharacterized LOC128929635 Neighboring gene uncharacterized LOC118147340 Neighboring gene S1 RNA binding domain 1 Neighboring gene uncharacterized LOC118147341

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables diacylglycerol-dependent, calcium-independent serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein kinase C epsilon type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071455.1 Reference mCalJa1.2.pat.X

    Range
    66434823..66977222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035272648.2 → XP_035128539.1  protein kinase C epsilon type isoform X1

    UniProtKB/TrEMBL
    F6U9Y6, U3C3Y9, U3FXN4
    Conserved Domains (4) summary
    cd04014
    Location:3 → 135
    C2_PKC_epsilon; C2 domain in Protein Kinase C (PKC) epsilon
    cd05591
    Location:412 → 732
    STKc_nPKC_epsilon; Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon
    cd20835
    Location:161 → 224
    C1_nPKC_epsilon-like_rpt1; first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins
    cd20838
    Location:241 → 295
    C1_nPKC_epsilon-like_rpt2; second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins

  2. XM_035272650.2 → XP_035128541.1  protein kinase C epsilon type isoform X3

    UniProtKB/TrEMBL
    A0A8J8XW40, U3C3Y9
    Conserved Domains (3) summary
    cd05591
    Location:406 → 726
    STKc_nPKC_epsilon; Catalytic domain of the Serine/Threonine Kinase, Novel Protein Kinase C epsilon
    cd20835
    Location:155 → 218
    C1_nPKC_epsilon-like_rpt1; first protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins
    cd20838
    Location:235 → 289
    C1_nPKC_epsilon-like_rpt2; second protein kinase C conserved region 1 (C1 domain) found in novel protein kinase C (nPKC) epsilon, eta, and similar proteins

  3. XM_054245003.1 → XP_054100978.1  protein kinase C epsilon type isoform X2

    UniProtKB/TrEMBL
    U3C3Y9
Nucleotide Protein
Heading Accession and Version

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