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RPSA ribosomal protein SA [ Callithrix jacchus (white-tufted-ear marmoset) ]

Gene ID: 100386844, updated on 8-Mar-2024

Summary

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Gene symbol
RPSA
Gene description
ribosomal protein SA
See related
Ensembl:ENSCJAG00000009675
Gene type
protein coding
RefSeq status
MODEL
Organism
Callithrix jacchus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix
Orthologs
human mouse all
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Genomic context

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See RPSA in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_03 current mCalJa1.2.pat.X (GCF_011100555.1) 17 NC_071458.1 (70323191..70329770)
105 previous assembly Callithrix_jacchus_cj1700_1.1 (GCF_009663435.1) 17 NC_048399.1 (70506604..70513172)

Chromosome 17 - NC_071458.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118148989 Neighboring gene uncharacterized LOC118148988 Neighboring gene solute carrier family 25 member 38 Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene myelin associated oligodendrocyte basic protein Neighboring gene uncharacterized LOC108588891

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Development of the first marmoset-specific DNA microarray (EUMAMA): a new genetic tool for large-scale expression profiling in a non-human primate. Datson NA, et al. BMC Genomics, 2007 Jun 25. PMID 17592630, Free PMC Article
  2. De novo assembly of the common marmoset transcriptome from NextGen mRNA sequences. Maudhoo MD, et al. Gigascience, 2014. PMID 25243066, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables laminin receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 90S preribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein SA
Names
40S ribosomal protein SA-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_011100555.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCalJa1.2.pat.X

Genomic

  1. NC_071458.1 Reference mCalJa1.2.pat.X

    Range
    70323191..70329770
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054246967.1 → XP_054102942.1  40S ribosomal protein SA

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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