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DIDO1 death inducer-obliterator 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100226813, updated on 13-Aug-2024

Summary

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Gene symbol
DIDO1
Gene description
death inducer-obliterator 1
See related
Ensembl:ENSTGUG00000007595
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 20 NC_044232.2 (9442223..9493951)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 20 NC_045018.1 (9693617..9746563)

Chromosome 20 - NC_044232.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 17 member 9 Neighboring gene GID complex subunit 8 homolog Neighboring gene transcription factor like 5 Neighboring gene collagen type IX alpha 3 chain Neighboring gene opioid growth factor receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
death-inducer obliterator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044232.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    9442223..9493951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030288670.3 → XP_030144530.3  death-inducer obliterator 1

    UniProtKB/TrEMBL
    H0ZB71
    Conserved Domains (6) summary
    smart00510
    Location:755 → 856
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    COG5271
    Location:1463 → 1677
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR01385
    Location:637 → 860
    TFSII; transcription elongation factor S-II
    TIGR01622
    Location:2230 → 2294
    SF-CC1; splicing factor, CC1-like family
    cd15639
    Location:352 → 405
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam09606
    Location:1868 → 2172
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  2. XM_030288669.3 → XP_030144529.3  death-inducer obliterator 1

    UniProtKB/TrEMBL
    H0ZB71
    Conserved Domains (6) summary
    smart00510
    Location:755 → 856
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    COG5271
    Location:1463 → 1677
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR01385
    Location:637 → 860
    TFSII; transcription elongation factor S-II
    TIGR01622
    Location:2230 → 2294
    SF-CC1; splicing factor, CC1-like family
    cd15639
    Location:352 → 405
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam09606
    Location:1868 → 2172
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

  3. XM_030288668.3 → XP_030144528.3  death-inducer obliterator 1

    UniProtKB/TrEMBL
    H0ZB71
    Conserved Domains (6) summary
    smart00510
    Location:755 → 856
    TFS2M; Domain in the central regions of transcription elongation factor S-II (and elsewhere)
    COG5271
    Location:1463 → 1677
    MDN1; Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis]
    TIGR01385
    Location:637 → 860
    TFSII; transcription elongation factor S-II
    TIGR01622
    Location:2230 → 2294
    SF-CC1; splicing factor, CC1-like family
    cd15639
    Location:352 → 405
    PHD_DIDO1_like; PHD finger found in death-inducer obliterator variants Dido1, Dido2, and Dido3
    pfam09606
    Location:1868 → 2172
    Med15; ARC105 or Med15 subunit of Mediator complex non-fungal

RNA

  1. XR_005982289.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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