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SEC24C SEC24 homolog C, COPII coat complex component [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100224134, updated on 8-Mar-2024

Summary

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Gene symbol
SEC24C
Gene description
SEC24 homolog C, COPII coat complex component
See related
Ensembl:ENSTGUG00000006974
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See SEC24C in Genome Data Viewer
Location:
chromosome: 6
Exon count:
26
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 6 NC_044218.2 (15525348..15564520, complement)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 6 NC_045005.1 (14771261..14810366, complement)

Chromosome 6 - NC_044218.2Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene fucosyltransferase 11 Neighboring gene synaptopodin 2 like Neighboring gene myozenin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in COPII-coated vesicle cargo loading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein transport protein Sec24C
Names
SEC24 family, member C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044218.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    15525348..15564520 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030276869.3 → XP_030132729.3  protein transport protein Sec24C isoform X6

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    PHA03247
    Location:2 → 348
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:215 → 1091
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  2. XM_030276868.3 → XP_030132728.3  protein transport protein Sec24C isoform X5

    UniProtKB/TrEMBL
    A0A674HFH7
    Conserved Domains (2) summary
    PHA03247
    Location:10 → 372
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:226 → 1102
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  3. XM_041717144.1 → XP_041573078.1  protein transport protein Sec24C isoform X4

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    COG5028
    Location:264 → 1117
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam03154
    Location:5 → 308
    Atrophin-1; Atrophin-1 family

  4. XM_030276871.3 → XP_030132731.3  protein transport protein Sec24C isoform X8

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    PHA03377
    Location:11 → 160
    PHA03377; EBNA-3C; Provisional
    COG5028
    Location:186 → 1062
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  5. XM_030276863.3 → XP_030132723.3  protein transport protein Sec24C isoform X1

    UniProtKB/TrEMBL
    A0A674HNE7, H0Z9G3
    Conserved Domains (3) summary
    PHA03247
    Location:47 → 439
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:293 → 1169
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam02084
    Location:10 → 82
    Bindin

  6. XM_041717147.1 → XP_041573081.1  protein transport protein Sec24C isoform X10

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    PHA03377
    Location:11 → 160
    PHA03377; EBNA-3C; Provisional
    COG5028
    Location:186 → 1039
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  7. XM_041717146.1 → XP_041573080.1  protein transport protein Sec24C isoform X9

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    COG5028
    Location:197 → 1050
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam03154
    Location:8 → 225
    Atrophin-1; Atrophin-1 family

  8. XM_041717145.1 → XP_041573079.1  protein transport protein Sec24C isoform X7

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    PHA03247
    Location:10 → 343
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:197 → 1073
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  9. XM_030276866.3 → XP_030132726.3  protein transport protein Sec24C isoform X3

    UniProtKB/TrEMBL
    A0A674H5D9, A0A674HNE7
    Conserved Domains (2) summary
    PHA03247
    Location:11 → 410
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:264 → 1140
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]

  10. XM_030276864.3 → XP_030132724.3  protein transport protein Sec24C isoform X1

    UniProtKB/TrEMBL
    A0A674HNE7, H0Z9G3
    Conserved Domains (3) summary
    PHA03247
    Location:47 → 439
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:293 → 1169
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
    pfam02084
    Location:10 → 82
    Bindin

  11. XM_041717143.1 → XP_041573077.1  protein transport protein Sec24C isoform X2

    UniProtKB/TrEMBL
    A0A674HNE7
    Conserved Domains (2) summary
    PHA03247
    Location:18 → 318
    PHA03247; large tegument protein UL36; Provisional
    COG5028
    Location:293 → 1146
    COG5028; Vesicle coat complex COPII, subunit SEC24/subunit SFB2/subunit SFB3 [Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version

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