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ANKIB1 ankyrin repeat and IBR domain containing 1 [ Taeniopygia guttata (zebra finch) ]

Gene ID: 100220050, updated on 8-Mar-2024

Summary

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Gene symbol
ANKIB1
Gene description
ankyrin repeat and IBR domain containing 1
See related
Ensembl:ENSTGUG00000001471
Gene type
protein coding
RefSeq status
MODEL
Organism
Taeniopygia guttata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia
Orthologs
human mouse all
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Genomic context

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See ANKIB1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bTaeGut1.4.pri (GCF_003957565.2) 2 NC_044213.2 (23372406..23459489)
105 previous assembly bTaeGut2.pat.W.v2 (GCF_008822105.2) 2 NC_045000.1 (23232434..23319706)

Chromosome 2 - NC_044213.2Genomic Context describing neighboring genes Neighboring gene lanosterol 14-alpha demethylase Neighboring gene KRIT1 ankyrin repeat containing Neighboring gene GATA zinc finger domain containing 1 Neighboring gene peroxisomal biogenesis factor 1 Neighboring gene RNA binding motif protein 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ankyrin repeat and IBR domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Taeniopygia guttata Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bTaeGut1.4.pri Primary Assembly

Genomic

  1. NC_044213.2 Reference bTaeGut1.4.pri Primary Assembly

    Range
    23372406..23459489
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030266951.3 → XP_030122811.3  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674HCQ8
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  2. XM_030266957.3 → XP_030122817.3  ankyrin repeat and IBR domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    H0YTA5
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  3. XM_030266955.3 → XP_030122815.3  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674HCQ8
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  4. XM_002196165.6 → XP_002196201.3  ankyrin repeat and IBR domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A674HCQ8
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  5. XM_012571530.4 → XP_012426984.3  ankyrin repeat and IBR domain-containing protein 1 isoform X3

    UniProtKB/TrEMBL
    H0YTA5
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins

  6. XM_030266956.3 → XP_030122816.3  ankyrin repeat and IBR domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A674HCQ8
    Conserved Domains (4) summary
    smart00647
    Location:403 → 479
    IBR; In Between Ring fingers
    COG0666
    Location:18 → 201
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:47 → 77
    ANK; ANK repeat [structural motif]
    cd16774
    Location:333 → 389
    RING-HC_RBR_ANKIB1; RING finger, HC subclass, found in ankyrin repeat and IBR domain-containing protein 1 (ANKIB1) and similar proteins
Nucleotide Protein
Heading Accession and Version

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