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ARHGAP1 Rho GTPase activating protein 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171769, updated on 26-Mar-2024

Summary

Gene symbol
ARHGAP1
Gene description
Rho GTPase activating protein 1
Locus tag
CR201_G0010934
See related
Ensembl:ENSPPYG00000003319
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

Location:
chromosome: 9
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 9 NC_071994.2 (20437484..20462804)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 11 NC_071996.1 (20415273..20440458)

Chromosome 9 - NC_071994.2Genomic Context describing neighboring genes Neighboring gene coagulation factor II, thrombin Neighboring gene zinc finger protein 408 Neighboring gene autophagy related 13 Neighboring gene harbinger transposase derived 1 Neighboring gene autophagy and beclin 1 regulator 1

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp469E2128

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of endocytic recycling IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in small GTPase-mediated signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
rho GTPase-activating protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001131430.1NP_001124902.1  rho GTPase-activating protein 1

    See identical proteins and their annotated locations for NP_001124902.1

    Status: PROVISIONAL

    Source sequence(s)
    CR857648
    UniProtKB/TrEMBL
    Q5RE86
    Conserved Domains (1) summary
    pfam13716
    Location:82206
    CRAL_TRIO_2; Divergent CRAL/TRIO domain

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071994.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    20437484..20462804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009246390.4XP_009244665.2  rho GTPase-activating protein 1 isoform X1