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KIF1C kinesin family member 1C [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100171679, updated on 6-Jun-2024

Summary

Gene symbol
KIF1C
Gene description
kinesin family member 1C
Locus tag
CR201_G0041563
See related
Ensembl:ENSPPYG00000007855
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

Location:
chromosome: 19
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (4807156..4832067)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 17 NC_072002.1 (4814682..4840693)

Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene sperm associated antigen 7 Neighboring gene calmodulin binding transcription activator 2 Neighboring gene inhibitor of CDK, cyclin A1 interacting protein 1 Neighboring gene uncharacterized LOC112129648 Neighboring gene solute carrier family 52 member 1 Neighboring gene ZFP3 zinc finger protein Neighboring gene uncharacterized LOC134760455

Genomic regions, transcripts, and products

General gene information

Markers

Clone Names

  • DKFZp468E0822

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables microtubule motor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001374305.2NP_001361234.1  kinesin-like protein KIF1C

    Status: VALIDATED

    Source sequence(s)
    JAQQLQ020000023
    UniProtKB/TrEMBL
    A0A2J8SPW2, A0A2J8SPW5, H2NSD6
    Conserved Domains (3) summary
    cd00060
    Location:499599
    FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
    cd01365
    Location:4355
    KISc_KIF1A_KIF1B; Kinesin motor domain, KIF1_like proteins
    pfam16183
    Location:352522
    Kinesin_assoc; Kinesin-associated

RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    4807156..4832067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063717828.1XP_063573898.1  kinesin-like protein KIF1C isoform X1

    UniProtKB/TrEMBL
    A0A2J8SPW2, A0A2J8SPW5, H2NSD6
  2. XM_063717826.1XP_063573896.1  kinesin-like protein KIF1C isoform X1

    UniProtKB/TrEMBL
    A0A2J8SPW2, A0A2J8SPW5, H2NSD6
  3. XM_063717827.1XP_063573897.1  kinesin-like protein KIF1C isoform X1

    UniProtKB/TrEMBL
    A0A2J8SPW2, A0A2J8SPW5, H2NSD6

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001131349.1: Suppressed sequence

    Description
    NM_001131349.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.