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commd2 COMM domain containing 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100127739, updated on 8-Mar-2024

Summary

Official Symbol
commd2provided by Xenbase
Official Full Name
COMM domain containing 2provided by Xenbase
Primary source
Xenbase:XB-GENE-955244
See related
Ensembl:ENSXETG00000043998
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (122451913..122466988, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (118976451..118991508, complement)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene transmembrane 4 L six family member 4 Neighboring gene WW domain containing transcription regulator 1 Neighboring gene calsyntenin 2 Neighboring gene uncharacterized LOC105945392 Neighboring gene solute carrier family 25 (pyrimidine nucleotide carrier), member 36

Genomic regions, transcripts, and products

General protein information

Preferred Names
COMM domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001113076.1NP_001106547.1  COMM domain-containing protein 2

    See identical proteins and their annotated locations for NP_001106547.1

    Status: PROVISIONAL

    Source sequence(s)
    BC154925
    UniProtKB/TrEMBL
    A8WH05
    Conserved Domains (1) summary
    cd04750
    Location:26190
    Commd2; COMM_Domain containing protein 2. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    122451913..122466988 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012962657.3XP_012818111.1  COMM domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A803JR37
    Related
    ENSXETP00000110450.1, ENSXETT00000115552.1
    Conserved Domains (1) summary
    cd04750
    Location:46210
    Commd2; COMM_Domain containing protein 2. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...
  2. XM_012962658.3XP_012818112.1  COMM domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A803JFQ8
    Related
    ENSXETP00000106730.1, ENSXETT00000118106.1
    Conserved Domains (1) summary
    cd04750
    Location:10174
    Commd2; COMM_Domain containing protein 2. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several ...