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tbcel tubulin folding cofactor E-like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100125781, updated on 8-Mar-2024

Summary

Official Symbol
tbcelprovided by Xenbase
Official Full Name
tubulin folding cofactor E-likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-854925
See related
Ensembl:ENSXETG00000024614
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
lrrc35
Orthologs
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Genomic context

See tbcel in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 7 NC_030683.2 (78341767..78384159, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 7 NC_030683.1 (87880500..87914192)

Chromosome 7 - NC_030683.2Genomic Context describing neighboring genes Neighboring gene microRNA mir-125b-1 Neighboring gene tectorin alpha gene 1 Neighboring gene TLC domain containing 5 Neighboring gene glutamate receptor, ionotropic, kainate 4

Genomic regions, transcripts, and products

General protein information

Preferred Names
tubulin-specific chaperone cofactor E-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001105283.1NP_001098753.1  tubulin-specific chaperone cofactor E-like protein

    See identical proteins and their annotated locations for NP_001098753.1

    Status: PROVISIONAL

    Source sequence(s)
    BC152485
    UniProtKB/TrEMBL
    A7MD56, F7D811
    Conserved Domains (4) summary
    sd00033
    Location:76101
    LRR_RI; leucine-rich repeat [structural motif]
    cd17045
    Location:337422
    Ubl_TBCEL; ubiquitin-like (Ubl) domain found in tubulin-specific chaperone cofactor E-like protein (TBCEL) and similar proteins
    pfam14580
    Location:188304
    LRR_9; Leucine-rich repeat
    cd21340
    Location:50112
    PPP1R42; protein phosphatase 1 regulatory subunit 42

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030683.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    78341767..78384159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031904771.1XP_031760631.1  tubulin-specific chaperone cofactor E-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6I8S6Q7
    Related
    ENSXETP00000088859.1, ENSXETT00000087936.2
    Conserved Domains (4) summary
    sd00033
    Location:90115
    LRR_RI; leucine-rich repeat [structural motif]
    cd17045
    Location:351436
    Ubl_TBCEL; ubiquitin-like (Ubl) domain found in tubulin-specific chaperone cofactor E-like protein (TBCEL) and similar proteins
    pfam14580
    Location:202318
    LRR_9; Leucine-rich repeat
    cd21340
    Location:64126
    PPP1R42; protein phosphatase 1 regulatory subunit 42
  2. XM_031904772.1XP_031760632.1  tubulin-specific chaperone cofactor E-like protein isoform X2

    UniProtKB/TrEMBL
    A7MD56, F7D811
    Conserved Domains (4) summary
    sd00033
    Location:76101
    LRR_RI; leucine-rich repeat [structural motif]
    cd17045
    Location:337422
    Ubl_TBCEL; ubiquitin-like (Ubl) domain found in tubulin-specific chaperone cofactor E-like protein (TBCEL) and similar proteins
    pfam14580
    Location:188304
    LRR_9; Leucine-rich repeat
    cd21340
    Location:50112
    PPP1R42; protein phosphatase 1 regulatory subunit 42