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EXOSC4 exosome component 4 [ Ornithorhynchus anatinus (platypus) ]

Gene ID: 100093511, updated on 30-Apr-2024

Summary

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Gene symbol
EXOSC4
Gene description
exosome component 4
See related
Ensembl:ENSOANG00000043411
Gene type
protein coding
RefSeq status
MODEL
Organism
Ornithorhynchus anatinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Monotremata; Ornithorhynchidae; Ornithorhynchus
Orthologs
human mouse all
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Genomic context

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See EXOSC4 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
105 current mOrnAna1.pri.v4 (GCF_004115215.2) 4 NC_041731.1 (8466002..8469315, complement)

Chromosome 4 - NC_041731.1Genomic Context describing neighboring genes Neighboring gene cytochrome c1, heme protein, mitochondrial Neighboring gene glycosylphosphatidylinositol anchor attachment 1 Neighboring gene 5-oxoprolinase, ATP-hydrolysing Neighboring gene sphingomyelin phosphodiesterase 5 Neighboring gene uncharacterized LOC114811198 Neighboring gene spermatogenesis and centriole associated 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_041731.1 Chromosome 4 Reference mOrnAna1.pri.v4 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex component RRP41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ornithorhynchus anatinus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOrnAna1.pri.v4 Primary Assembly

Genomic

  1. NC_041731.1 Reference mOrnAna1.pri.v4 Primary Assembly

    Range
    8466002..8469315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001515454.4 → XP_001515504.1  exosome complex component RRP41

    UniProtKB/TrEMBL
    A0A6I8NYH9
    Related
    ENSOANP00000046445.1
    Conserved Domains (2) summary
    cd11370
    Location:11 → 237
    RNase_PH_RRP41; RRP41 subunit of eukaryotic exosome
    PRK03983
    Location:1 → 225
    PRK03983; exosome complex exonuclease Rrp41; Provisional
Nucleotide Protein
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Research Materials