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STX4 syntaxin 4 [ Equus caballus (horse) ]

Gene ID: 100063460, updated on 8-Mar-2024

Summary

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Official Symbol
STX4provided by VGNC
Official Full Name
syntaxin 4provided by VGNC
Primary source
VGNC:VGNC:23731
See related
Ensembl:ENSECAG00000010655
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See STX4 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (19841670..19847193, complement)
102 previous assembly EquCab2.0 (GCF_000002305.2) 13 NC_009156.2 (18758954..18764395, complement)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 646 Neighboring gene zinc finger protein 668 Neighboring gene uncharacterized LOC106781540 Neighboring gene uncharacterized LOC106781541 Neighboring gene syntaxin 1B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle docking IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntaxin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    19841670..19847193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001500858.5 → XP_001500908.2  syntaxin-4

    UniProtKB/TrEMBL
    F6ZGZ1
    Related
    ENSECAP00000009093.3, ENSECAT00000011614.3
    Conserved Domains (2) summary
    cd00179
    Location:39 → 189
    SynN; Syntaxin N-terminus domain; syntaxins are nervous system-specific proteins implicated in the docking of synaptic vesicles with the presynaptic plasma membrane; they are a family of receptors for intracellular transport vesicles; each target membrane may ...
    cl22856
    Location:199 → 260
    SNARE; SNARE motif
Nucleotide Protein
Heading Accession and Version

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Research Materials