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LAPTM5 lysosomal protein transmembrane 5 [ Equus caballus (horse) ]

Gene ID: 100056331, updated on 8-Mar-2024

Summary

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Official Symbol
LAPTM5provided by VGNC
Official Full Name
lysosomal protein transmembrane 5provided by VGNC
Primary source
VGNC:VGNC:19583
See related
Ensembl:ENSECAG00000000686
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See LAPTM5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
103 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (25722441..25746201)
102 previous assembly EquCab2.0 (GCF_000002305.2) 2 NC_009145.2 (25724997..25748754)

Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene pumilio RNA binding family member 1 Neighboring gene small nucleolar RNA SNORD103/SNORD85 Neighboring gene syndecan 3 Neighboring gene uncharacterized LOC106782816 Neighboring gene matrilin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosomal-associated transmembrane protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Equus caballus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009145.3 Reference EquCab3.0 Primary Assembly

    Range
    25722441..25746201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001503920.5 → XP_001503970.2  lysosomal-associated transmembrane protein 5

    UniProtKB/TrEMBL
    A0A9L0S7F4
    Related
    ENSECAP00000070088.1, ENSECAT00000087974.1
    Conserved Domains (1) summary
    pfam03821
    Location:30 → 260
    Mtp; Golgi 4-transmembrane spanning transporter
Nucleotide Protein
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