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DPY19L3 dpy-19 like C-mannosyltransferase 3 [ Equus caballus (horse) ]

Gene ID: 100055362, updated on 17-Aug-2024

Summary

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Official Symbol
DPY19L3provided by VGNC
Official Full Name
dpy-19 like C-mannosyltransferase 3provided by VGNC
Primary source
VGNC:VGNC:50475
See related
Ensembl:ENSECAG00000000212
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See DPY19L3 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (3861092..3936931)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene zinc finger protein 507 Neighboring gene uncharacterized LOC111775170 Neighboring gene collagen alpha-1(I) chain-like Neighboring gene uncharacterized LOC106782022 Neighboring gene 60S ribosomal protein L24-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein C-mannosyl-transferase DPY19L3
Names
dpy-19 like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    3861092..3936931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023649476.1 → XP_023505244.1  protein C-mannosyl-transferase DPY19L3 isoform X2

    UniProtKB/TrEMBL
    A0A9L0R131, A0A9L0TAX4
    Related
    ENSECAP00000083735.1, ENSECAT00000106367.1
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 670
    Dpy19; Q-cell neuroblast polarisation

  2. XM_023649477.1 → XP_023505245.1  protein C-mannosyl-transferase DPY19L3 isoform X3

    UniProtKB/TrEMBL
    A0A9L0R131
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 639
    Dpy19; Q-cell neuroblast polarisation

  3. XM_023649475.1 → XP_023505243.1  protein C-mannosyl-transferase DPY19L3 isoform X1

    UniProtKB/TrEMBL
    A0A9L0R131
    Related
    ENSECAP00000056143.1, ENSECAT00000120264.1
    Conserved Domains (1) summary
    pfam10034
    Location:56 → 711
    Dpy19; Q-cell neuroblast polarisation

  4. XM_023649478.1 → XP_023505246.1  protein C-mannosyl-transferase DPY19L3 isoform X4

    UniProtKB/TrEMBL
    A0A9L0R131
    Conserved Domains (1) summary
    pfam10034
    Location:1 → 611
    Dpy19; Q-cell neuroblast polarisation

RNA

  1. XR_002810661.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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