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GARRE1 granule associated Rac and RHOG effector 1 [ Equus caballus (horse) ]

Gene ID: 100050138, updated on 17-Aug-2024

Summary

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Official Symbol
GARRE1provided by VGNC
Official Full Name
granule associated Rac and RHOG effector 1provided by VGNC
Primary source
VGNC:VGNC:19358
See related
Ensembl:ENSECAG00000004299
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Also known as
KIAA0355
Orthologs
human mouse all
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Genomic context

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See GARRE1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (5470423..5546477)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111775180 Neighboring gene LSM14A mRNA processing body assembly factor Neighboring gene uncharacterized LOC111775181 Neighboring gene glucose-6-phosphate isomerase Neighboring gene programmed cell death 2 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CCR4-NOT complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Rac protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
granule associated Rac and RHOG effector protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    5470423..5546477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023649503.1 → XP_023505271.1  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RG02
    Related
    ENSECAP00000003992.2, ENSECAT00000005657.3
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  2. XM_014733613.2 → XP_014589099.1  granule associated Rac and RHOG effector protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A9L0RG02
    Conserved Domains (1) summary
    pfam15923
    Location:72 → 187
    DUF4745; Domain of unknown function (DUF4745)

  3. XM_014733607.2 → XP_014589093.1  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RG02
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  4. XM_005596130.3 → XP_005596187.1  granule associated Rac and RHOG effector protein 1 isoform X4

    See identical proteins and their annotated locations for XP_005596187.1

    UniProtKB/TrEMBL
    A0A9L0SPK9, A0A9L0TET8
    Related
    ENSECAP00000084834.1, ENSECAT00000138608.1
    Conserved Domains (1) summary
    pfam15923
    Location:72 → 187
    DUF4745; Domain of unknown function (DUF4745)

  5. XM_014733638.2 → XP_014589124.1  granule associated Rac and RHOG effector protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A9L0SPK9
    Conserved Domains (1) summary
    pfam15923
    Location:72 → 187
    DUF4745; Domain of unknown function (DUF4745)

  6. XM_023649504.1 → XP_023505272.1  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RG02
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  7. XM_005596128.3 → XP_005596185.1  granule associated Rac and RHOG effector protein 1 isoform X1

    See identical proteins and their annotated locations for XP_005596185.1

    UniProtKB/TrEMBL
    A0A9L0RG02
    Related
    ENSECAP00000075933.1, ENSECAT00000127767.1
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)

  8. XM_023649505.1 → XP_023505273.1  granule associated Rac and RHOG effector protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RG02
    Related
    ENSECAP00000060725.1, ENSECAT00000101941.1
    Conserved Domains (1) summary
    pfam15923
    Location:59 → 187
    DUF4745; Domain of unknown function (DUF4745)
Nucleotide Protein
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