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    rabN2 Rab GTPase [ Dictyostelium discoideum AX4 ]

    Gene ID: 8627836, updated on 18-Sep-2024

    Summary

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    Official Symbol
    rabN2
    Official Full Name
    Rab GTPase
    Primary source
    dictyBase:DDB_G0290793
    Locus tag
    DDB_G0290793
    See related
    AmoebaDB:DDB_G0290793; VEuPathDB:DDB_G0290793
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Dictyostelium discoideum AX4 (strain: AX4)
    Lineage
    Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales; Dictyosteliaceae; Dictyostelium
    Old locus tag
    DDBDRAFT_0189089; DDBDRAFT_0230028; DDB_0189089; DDB_0230028
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_007091.3 (4612672..4613226, complement)

    Chromosome 5 - NC_007091.3Genomic Context describing neighboring genes Neighboring gene Rab GTPase Neighboring gene Rab GTPase domain-containing protein Neighboring gene HD domain-containing protein 2 Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_007091.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by dictyBase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in phagosome-lysosome fusion IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    is_active_in late endosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in lysosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    is_active_in phagocytic vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    Rab GTPase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_007091.3 Reference assembly

      Range
      4612672..4613226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_630446.1 → XP_635538.1  Rab GTPase [Dictyostelium discoideum AX4]

      See identical proteins and their annotated locations for XP_635538.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q54FK2
      Conserved Domains (2) summary
      pfam00071
      Location:1 → 175
      Ras; Ras family
      cl21455
      Location:2 → 176
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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