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    55 putative replicase [ Streptocarpus flower break virus ]

    Gene ID: 4308462, updated on 16-Aug-2018

    Summary

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    Gene symbol
    55
    Gene description
    putative replicase
    Locus tag
    SFBV_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Streptocarpus flower break virus
    Lineage
    Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Virgaviridae; Tobamovirus
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    Genomic context

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    Sequence:
    NC_008365.1 (59..4879)

    NC_008365.1Genomic Context describing neighboring genes Neighboring gene putative replicase Neighboring gene movement protein Neighboring gene coat protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_008365.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The phylogenetic structure of the cluster of tobamovirus species serologically related to ribgrass mosaic virus (RMV) and the sequence of streptocarpus flower break virus (SFBV). Heinze C, et al. Arch Virol, 2006 Apr. PMID 16328151

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative replicase
    YP_762617.1
    • p55 is translated due to a read through of the p124 stop codon

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_008365.1 Reference assembly

      Range
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_762617.1 putative replicase [Streptocarpus flower break virus]

      See identical proteins and their annotated locations for YP_762617.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      Q1XF44
      Conserved Domains (3) summary
      pfam00978
      Location:1157 → 1598
      RdRP_2; RNA dependent RNA polymerase
      pfam01443
      Location:816 → 1074
      Viral_helicase1; Viral (Superfamily 1) RNA helicase
      pfam01660
      Location:50 → 432
      Vmethyltransf; Viral methyltransferase
    Nucleotide Protein
    Heading Accession and Version

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