U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CG5697 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 42483, updated on 10-May-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG5697provided by FlyBase
    Primary source
    FLYBASE:FBgn0038846
    Locus tag
    Dmel_CG5697
    See related
    AllianceGenome:FB:FBgn0038846
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RH32180; Dmel\CG5697
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG5697 in Genome Data Viewer
    Location:
    93B4-93B4; 3-70 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21015949..21017120)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (16841671..16842842)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Na/Ca-exchange protein Neighboring gene uncharacterized protein Neighboring gene Alkaline phosphatase 5 Neighboring gene Ral interacting protein Neighboring gene pegasus

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A Drosophila model of the neurodegenerative disease SCA17 reveals a role of RBP-J/Su(H) in modulating the pathological outcome. Ren J, et al. Hum Mol Genet, 2011 Sep 1. PMID 21653638, Free PMC Article
    2. A GATA/RUNX cis-regulatory module couples Drosophila blood cell commitment and differentiation into crystal cells. Ferjoux G, et al. Dev Biol, 2007 May 15. PMID 17418114
    3. Selection for cold resistance alters gene transcript levels in Drosophila melanogaster. Telonis-Scott M, et al. J Insect Physiol, 2009 Jun. PMID 19232407
    4. Transcriptomic analysis of inbreeding depression in cold-sensitive Drosophila melanogaster shows upregulation of the immune response. Vermeulen CJ, et al. J Evol Biol, 2013 Sep. PMID 23944235
    5. The genetic basis for variation in olfactory behavior in Drosophila melanogaster. Arya GH, et al. Chem Senses, 2015 May. PMID 25687947, Free PMC Article

    See all (21) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG5697-PA
    CG5697-PB
    CG5697-PC
    CG5697-PD

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      21015949..21017120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_142675.2 → NP_650932.1  uncharacterized protein Dmel_CG5697, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650932.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDG3
      Related
      FBpp0083405, FBtr0084001
      Conserved Domains (1) summary
      pfam16028
      Location:45 → 108
      SLC3A2_N; Solute carrier family 3 member 2 N-terminus

    2. NM_001260291.1 → NP_001247220.1  uncharacterized protein Dmel_CG5697, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247220.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDG3
      Conserved Domains (1) summary
      pfam16028
      Location:45 → 108
      SLC3A2_N; Solute carrier family 3 member 2 N-terminus

    3. NM_001260289.1 → NP_001247218.1  uncharacterized protein Dmel_CG5697, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247218.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDG3
      Conserved Domains (1) summary
      pfam16028
      Location:45 → 108
      SLC3A2_N; Solute carrier family 3 member 2 N-terminus

    4. NM_001260290.1 → NP_001247219.1  uncharacterized protein Dmel_CG5697, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001247219.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VDG3
      Conserved Domains (1) summary
      pfam16028
      Location:45 → 108
      SLC3A2_N; Solute carrier family 3 member 2 N-terminus
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VDG3 Q9VDG3

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools