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Report for CCDS49407.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
49407.1 Public Mus musculus 14 Kcnk16 23 108 98 CCDS HistoryNCBI Gene:74571Re-query CCDS DB by CCDS ID:49407.1Re-query CCDS DB by GeneID:74571See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 49407.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024155.8 ENSMUSP00000024155.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024155.8Link to Ensembl Protein Viewer:ENSMUSP00000024155.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000024155Re-query CCDS DB by Protein ID:ENSMUSP00000024155
Original member Current member NCBI NM_029006.2 NP_083282.1 Accepted alive Link to Nucleotide Sequence:NM_029006.2Link to Protein Sequence:NP_083282.1Re-query CCDS DB by Nucleotide ID:NM_029006Re-query CCDS DB by Protein ID:NP_083282Link to BLAST:NP_083282.1

Chromosomal Locations for CCDS 49407.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20262756 20262973 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20263249 20263414 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20264160 20264326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20265166 20265280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 20268950 20269162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGCCCCGTGCTGGGGTCTGCGGCTGCTGGGGTGGCCAAGTATTGCCCCTGCTTCTGGCCTATATCTGCT
ACCTACTGCTTGGGGCCACCATCTTCCAGCTGCTGGAGAAGCAGGCAGAGGCTCAATCCAGGGACCAGTT
CCAGCTGGAAAAGCTACGCTTCTTAGAGAACTACACCTGCCTAGACCAGCAGGCCCTGGAGCAGTTTGTA
CAGGTCATCCTGGAAGCCTGGGTGAAGGGTGTGAACCCCAAAGGCAACTCCACCAATCCCAGCAACTGGG
ACTTCGGGAGCAGCTTCTTCTTTGCAGGCACAGTGGTCACCACCATAGGTTATGGAAACCTGGCCCCCAG
CACGGAGGCAGGGCAGGTCTTCTGTGTCTTCTATGCTCTGATGGGGATCCCACTCAATGTGGTCTTCCTC
AACCATCTGGGCACAGGGCTGCGGGCCCACCTGACCACATTGGACAGGTGGGAGGACCACCCCAGGCATT
CCCAGCTCCTGCAGGTCCTGGGCCTGGCTCTGTTCCTGACCTTGGGGACCCTGGTCATTCTCATCTTCCC
ACCCATGTTCTTCAGCCACGTGGAGGGCTGGAGCTTCCGTGAGGGCTTCTACTTCGCGTTTATCACCCTC
AGCACCATTGGCTTCGGGGACTATGTTGTTGGCACAGACCCCAGCAAGCATTACATCGCTGTGTATCGGA
GCTTGGCAGCTATATGGATCCTCCTAGGACTGGCATGGCTGGCGGTGGTCCTCAGCCTGGGATCCCTGCT
TCTGCACAGGTGCTCCCGGCTCTGGCAGCTCATCAGAGGCCTGGACCTTAAGGATGGAGCAGCCCCTGAC
TCTGAGCCTAGATCACAGAAAATCCCCATCTCTGCATGA

Translation (292 aa):
MPRAGVCGCWGGQVLPLLLAYICYLLLGATIFQLLEKQAEAQSRDQFQLEKLRFLENYTCLDQQALEQFV
QVILEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEAGQVFCVFYALMGIPLNVVFL
NHLGTGLRAHLTTLDRWEDHPRHSQLLQVLGLALFLTLGTLVILIFPPMFFSHVEGWSFREGFYFAFITL
STIGFGDYVVGTDPSKHYIAVYRSLAAIWILLGLAWLAVVLSLGSLLLHRCSRLWQLIRGLDLKDGAAPD
SEPRSQKIPISA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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