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    Sslp1l1 secreted seminal-vesicle Ly-6 protein 1-like 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 171573, updated on 4-Apr-2024

    Summary

    Official Symbol
    Sslp1l1provided by RGD
    Official Full Name
    secreted seminal-vesicle Ly-6 protein 1-like 1provided by RGD
    Primary source
    RGD:727919
    See related
    Ensembl:ENSRNOG00000069348 AllianceGenome:RGD:727919
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Sslp1; Pate14; Pate14l
    Summary
    Predicted to be located in extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in Testes (RPKM 2.4), Brain (RPKM 0.5) and 2 other tissues See more
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    Genomic context

    Location:
    8q22
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (44482615..44493691, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (36299940..36304837, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (41442898..41445722, complement)

    Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene prostate and testis expressed 14 like 3 Neighboring gene acrosomal vesicle protein 1 Neighboring gene checkpoint kinase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    prostate and testis expressed protein 14
    Names
    prostate and testis expressed protein 14 like
    protein RSP-1
    secreted seminal-vesicle Ly-6 protein 1
    secreted seminal-vesicle Ly-6 protein 1 like
    spleen protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_138537.4NP_612546.1  prostate and testis expressed protein 14 precursor

      See identical proteins and their annotated locations for NP_612546.1

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000008
      UniProtKB/Swiss-Prot
      Q9QXN2
      UniProtKB/TrEMBL
      A6KU58
      Related
      ENSRNOP00000078877.1, ENSRNOT00000099536.1

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086026.1 Reference GRCr8

      Range
      44482615..44493691 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)