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    YPR196W putative maltose-responsive transcription factor [ Saccharomyces cerevisiae S288C ]

    Gene ID: 856326, updated on 7-Sep-2023

    Summary

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    Gene symbol
    YPR196W
    Gene description
    putative maltose-responsive transcription factor
    Primary source
    SGD:S000006400
    Locus tag
    YPR196W
    See related
    AllianceGenome:SGD:S000006400
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Saccharomyces cerevisiae S288C (strain: S288C)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
    Summary
    Enables sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription, DNA-templated. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: XVI
    Exon count:
    1
    Sequence:
    Chromosome: XVI; NC_001148.4 (931376..932788)

    Chromosome XVI - NC_001148.4Genomic Context describing neighboring genes Neighboring gene Opt2p Neighboring gene uncharacterized protein Neighboring gene Sge1p Neighboring gene Arr1p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_001148.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. MAL73, a novel regulator of maltose fermentation, is functionally impaired by single nucleotide polymorphism in sake brewing yeast. Ohdate T, et al. PLoS One, 2018. PMID 29894505, Free PMC Article
    2. Prolonged maltose-limited cultivation of Saccharomyces cerevisiae selects for cells with improved maltose affinity and hypersensitivity. Jansen ML, et al. Appl Environ Microbiol, 2004 Apr. PMID 15066785, Free PMC Article
    3. Common industrial sake yeast strains have three copies of the AQY1-ARR3 region of chromosome XVI in their genomes. Ogihara F, et al. Yeast, 2008 Jun. PMID 18509847
    4. Disruption of the transcription factors Thi2p and Nrm1p alleviates the post-glucose effect on xylose utilization in Saccharomyces cerevisiae. Wei S, et al. Biotechnol Biofuels, 2018. PMID 29686730, Free PMC Article
    5. Identifying cooperative transcription factors by combining ChIP-chip data and knockout data. Yang Y, et al. Cell Res, 2010 Nov. PMID 20975739

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by SGD

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sequence-specific DNA binding HDA PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative maltose-responsive transcription factor
    NP_015522.1
    • Putative maltose-responsive transcription factor

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_001148.4 Reference assembly

      Range
      931376..932788
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001184293.1 → NP_015522.1  TPA: putative maltose-responsive transcription factor [Saccharomyces cerevisiae S288C]

      See identical proteins and their annotated locations for NP_015522.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      D6W4J5, Q06595
      UniProtKB/TrEMBL
      A0A8H4F770, B3LKF2, C8ZJM5, N1NXX0
      Conserved Domains (2) summary
      cd12148
      Location:79 → 270
      fungal_TF_MHR; fungal transcription factor regulatory middle homology region
      smart00066
      Location:4 → 43
      GAL4; GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q06595.1

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