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    Su(Tpl) Suppressor of Triplolethal [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 40171, updated on 26-Apr-2024

    Summary

    Official Symbol
    Su(Tpl)provided by FlyBase
    Official Full Name
    Suppressor of Triplolethalprovided by FlyBase
    Primary source
    FLYBASE:FBgn0014037
    Locus tag
    Dmel_CG32217
    See related
    AllianceGenome:FB:FBgn0014037
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    0854/01; CG32217; CG8037; CR32216; dEll; dELL; Dmel\CG32217; Ell; ELL; l (3)76BD; l(3)76BDs; l(3)S000606; l(3)S085401; SR3-4A; SS3-4; Su(Tpl)/; SY3-1
    Summary
    Enables RNA polymerase binding activity and chromatin binding activity. Involved in several processes, including neuronal stem cell population maintenance; regulation of transcription, DNA-templated; and snRNA transcription by RNA polymerase II. Located in nucleolus; polytene chromosome puff; and transcriptionally active chromatin. Part of transcription elongation factor complex. Is expressed in adult brain cell body rind; adult optic lobe; and type II neuroblast. Orthologous to several human genes including ELL (elongation factor for RNA polymerase II) and ELL2 (elongation factor for RNA polymerase II 2). [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

    Location:
    76D3-76D4; 3-46 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (19889120..19909410, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (19882220..19902510, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Rab8 Neighboring gene Ubiquitin specific protease 32 Neighboring gene Mi-2 Neighboring gene long non-coding RNA:CR32218 Neighboring gene antisense RNA:CR43889 Neighboring gene Precursor RNA processing 3 Neighboring gene Mtr3 Neighboring gene Regulatory particle non-ATPase 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables RNA polymerase binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables chromatin binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables cis-regulatory region sequence-specific DNA binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of chromatin IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of euchromatin IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    located_in nucleolus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in nucleus HDA PubMed 
    located_in polytene chromosome puff IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of transcription elongation factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of transcription elongation factor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of transcription elongation factor complex IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    suppressor of triplolethal
    Names
    CG32217-PA
    CG32217-PB
    CG32217-PC
    Su(Tpl)-PA
    Su(Tpl)-PB
    Su(Tpl)-PC
    eleven-nineteen lysine-rich leukemia
    elongation factor RNA polymerase II
    suppressor of GMR-sina 3-4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      19889120..19909410 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001170006.2NP_001163477.1  suppressor of triplolethal, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001163477.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95VE6, Q9VW51
      UniProtKB/TrEMBL
      Q2XY14
      Conserved Domains (2) summary
      pfam07303
      Location:836935
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:16460
      ELL; RNA polymerase II elongation factor ELL
    2. NM_001300193.1NP_001287122.1  suppressor of triplolethal, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001287122.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95VE6, Q9VW51
      UniProtKB/TrEMBL
      Q2XY14
      Conserved Domains (2) summary
      pfam07303
      Location:836935
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:16460
      ELL; RNA polymerase II elongation factor ELL
    3. NM_140898.5NP_649155.3  suppressor of triplolethal, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649155.3

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q95VE6, Q9VW51
      UniProtKB/TrEMBL
      Q2XY14
      Related
      FBpp0074689
      Conserved Domains (2) summary
      pfam07303
      Location:836935
      Occludin_ELL; Occludin homology domain
      pfam10390
      Location:16460
      ELL; RNA polymerase II elongation factor ELL