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    LINC01151 long intergenic non-protein coding RNA 1151 [ Homo sapiens (human) ]

    Gene ID: 104266958, updated on 17-Sep-2024

    Summary

    Official Symbol
    LINC01151provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1151provided by HGNC
    Primary source
    HGNC:HGNC:49471
    See related
    AllianceGenome:HGNC:49471
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    Location:
    8q24.13
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (122670385..122694106, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (123801569..123825303, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (123682624..123706345, complement)

    Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105375733 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:123391043-123391713 Neighboring gene smooth muscle induced lncRNA, enhancer of proliferation Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:123479282-123479790 Neighboring gene uncharacterized LOC107986972 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr8:123501108-123501994 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19485 Neighboring gene Sharpr-MPRA regulatory region 11925 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27851 Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 1583 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:123701812-123703011 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:123705641-123706840 Neighboring gene uncharacterized LOC107986904 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27852 Neighboring gene Sharpr-MPRA regulatory region 2746 Neighboring gene hESC enhancers GRCh37_chr8:123770608-123771162 and GRCh37_chr8:123771163-123771718 Neighboring gene cyclin dependent kinase 5 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    General gene information

    Gene Ontology Provided by GOA

    Process Evidence Code Pubs
    involved_in RNA processing IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_126348.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC100872

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

      Range
      122670385..122694106 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060932.1 Alternate T2T-CHM13v2.0

      Range
      123801569..123825303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)