|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Jan 20, 2012 |
Title |
HCC1806, gene expression array U133Plus2 PFIZER |
Sample type |
RNA |
|
|
Source name |
HCC1806
|
Organism |
Homo sapiens |
Characteristics |
cell line: HCC1806
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA were isolated using an RNeasy kit (Qiagen, Germantown, MD).
|
Label |
biotin
|
Label protocol |
Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA).
|
|
|
Hybridization protocol |
Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA).
|
Scan protocol |
Protocol per manufacturer's protocol (Affymetrix, Santa Clara, CA).
|
Data processing |
Data were normalized using Bioconductor and the R package gcrma.
|
|
|
Submission date |
Dec 06, 2011 |
Last update date |
Jan 20, 2012 |
Contact name |
Keith A Ching |
E-mail(s) |
keith.ching@pfizer.com
|
Organization name |
Pfizer, Inc.
|
Department |
Computational Sciences
|
Street address |
10777 Science Center Dr.
|
City |
San Diego |
State/province |
CA |
ZIP/Postal code |
92121 |
Country |
USA |
|
|
Platform ID |
GPL570 |
Series (1) |
GSE34211 |
Pfizer Molecular Profile Data for Cell Lines |
|
Data table header descriptions |
ID_REF |
PROBE_DESIGN_ID |
VALUE |
log2R gcRMA normalized |
Data table |
ID_REF |
VALUE |
1007_s_at |
12.612938999028 |
1053_at |
11.4243710296692 |
117_at |
2.65487035325639 |
121_at |
6.59021132845936 |
1255_g_at |
2.05989433386658 |
1294_at |
2.14488677198389 |
1316_at |
3.5641481022294 |
1320_at |
3.19845614894682 |
1405_i_at |
3.8844452012136 |
1431_at |
2.86513374895626 |
1438_at |
1.9831662389543 |
1487_at |
8.94521605615645 |
1494_f_at |
2.32366653937022 |
1552256_a_at |
10.6090563429955 |
1552257_a_at |
10.1061222977564 |
1552258_at |
3.3146170243715 |
1552261_at |
2.73516237091281 |
1552263_at |
9.29415884083447 |
1552264_a_at |
9.10424643100832 |
1552266_at |
2.85297044995261 |
Total number of rows: 54675
Table truncated, full table size 1478 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM844546_HCC1806_1_PFIZER.CEL.gz |
4.3 Mb |
(ftp)(http) |
CEL |
Processed data included within Sample table |
|
|
|
|
|