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Sample GSM683856 Query DataSets for GSM683856
Status Public on Mar 01, 2011
Title Myers_K562_1_None_HudsonAlpha
Sample type SRA
Source name K562
Organism Homo sapiens
Characteristics cell: K562
cell organism: Human
cell description: leukemia
cell karyotype: cancer
cell lineage: "The continuous cell line K-562 was established by Lozzio and Lozzio from the pleural effusion of a 53-year-old female with chronic myelogenous leukemia in terminal blast crises." - ATCC
cell sex: F
replicate: 1
treatment: None
obtainedby: HudsonAlpha
Biomaterial provider ATCC
Growth protocol Cells were grown according to ENCODE cell culture protocols:
Extracted molecule genomic DNA
Extraction protocol For extraction protocol details see:
Library strategy Bisulfite-Seq
Library source genomic
Library selection Reduced Representation
Instrument model Illumina Genome Analyzer IIx
Description Reduced Representation
Data processing For data processing details see:
Submission date Mar 01, 2011
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL10999
Series (1)
GSE27584 DNA Methylation by Reduced Representation Bisulfite Seq from ENCODE/HudsonAlpha
SRA SRX066353
BioSample SAMN00621834

Supplementary file Size Download File type/resource
GSM683856_hg19_wgEncodeHaibMethylRrbsK562HaibSitesRep1.bedRrbs.gz 15.0 Mb (ftp)(http) BEDRRBS
SRA Run SelectorHelp
Processed data provided as supplementary file
Raw data are available in SRA

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