|
| Status |
Public on Jan 20, 2011 |
| Title |
HS214 |
| Sample type |
RNA |
| |
|
| Source name |
SN, PD
|
| Organism |
Homo sapiens |
| Characteristics |
age: 83.6
tissue: substantia nigra
diagnosis: Parkinson's disease
gender: M
|
| Treatment protocol |
None.
|
| Growth protocol |
None.
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol.
|
| |
|
| Hybridization protocol |
Standard Affymetrix protocols.
|
| Scan protocol |
Standard Affymetrix protocols.
|
| Description |
HS214
|
| Data processing |
The data were processed and scaled to a target intensity of 100 for all probe sets by MAS5 in Biocondutor affy package.
|
| |
|
| Submission date |
Feb 02, 2010 |
| Last update date |
Aug 16, 2011 |
| Contact name |
Bin Zheng |
| Organization name |
Brigham and Women's hospital
|
| Department |
Center for Neurologic Diseases
|
| Street address |
65 Landsdowne Street
|
| City |
Cambridge |
| State/province |
MA |
| ZIP/Postal code |
02139 |
| Country |
USA |
| |
|
| Platform ID |
GPL96 |
| Series (2) |
| GSE20164 |
Systematic meta-analysis and replication of genome-wide expression studies of Parkinson's disease: 3 |
| GSE20186 |
Systematic meta-analysis and replication of genome-wide expression studies of Parkinson's disease |
|
