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Series GSE86539 Query DataSets for GSE86539
Status Public on Feb 13, 2017
Title Human liver Huh cell transcriptome response to a Wild-type ΔVP30 Ebola virus, EHUH003 [mRNA]
Organism Homo sapiens
Experiment type Expression profiling by array
Summary The purpose is to obtain samples for mRNA analysis in human liver Huh cells using the following viruses obtained by reverse genetics: Zaire Ebola virus wild-type (WT) in the ΔVP30 background (wild).
 
Overall design Human liver Huh cells were infected with a Wild-type ΔVP30 Ebola virus. The Huh7.0 VP30 cells were on split 5 for this experiment. Infected samples were collected in quintuplet; time-matched mocks were collected in quintuplet in parallel with infected samples. Two time courses were performed to generate samples for this experiment (the second set was started within 24 h of the first set). The time courses were 0h, 8h, 24h, 48h, and 72h.
 
Contributor(s) Halfmann P, Thompson A, Waters KM, Eisfeld AJ, Kawaoka Y
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Submission date Sep 07, 2016
Last update date Jan 09, 2018
Contact name Natalie Heller
E-mail natalie.heller@pnnl.gov
Organization name PNNL
Street address 902 Battelle Blvd.
City Richland
ZIP/Postal code 99354
Country USA
 
Platforms (1)
GPL13497 Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Probe Name version)
Samples (48)
GSM2305331 EHUH003_Mock_0h_1_RNA
GSM2305332 EHUH003_Mock_0h_2_RNA
GSM2305333 EHUH003_Mock_0h_3_RNA
This SubSeries is part of SuperSeries:
GSE65575 Modeling Host Responses to Understand Severe Human Virus Infections
Relations
BioProject PRJNA342156

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE86539_RAW.tar 101.9 Mb (http)(custom) TAR (of TXT)
Raw data provided as supplementary file
Processed data included within Sample table

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