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| Status |
Public on Nov 15, 2017 |
| Title |
SMAD2/3 binding pattern in a breast epithelial cell line, MCF10A MII [ChIP-seq] |
| Organism |
Homo sapiens |
| Experiment type |
Genome binding/occupancy profiling by high throughput sequencing
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| Summary |
We report that SMAD2/3 are redirected to novel binding sites on the genome after prolonged TGFβ stimulation.
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| Overall design |
SMAD2/3 ChIP-seq analyses were performed in MCF10A MII cells at 2 different time points after TGFβ treatment.
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| Contributor(s) |
Morikawa M, Sundqvist A, Vasalaki E, Koinuma D, Aburatani H, Miyazono K, van Dam H, ten Dijke P |
| Citation(s) |
29186616 |
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| Submission date |
Jun 27, 2016 |
| Last update date |
May 15, 2019 |
| Contact name |
Masato Morikawa |
| E-mail(s) |
morikawa-tky@umin.ac.jp
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| Phone |
+81-3-3964-1211
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| Organization name |
Teikyo University
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| Department |
Advanced Comprehensive Research Organization
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| Street address |
2-21-1 Kaga, Itabashi-ku
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| City |
Tokyo |
| ZIP/Postal code |
173-0003 |
| Country |
Japan |
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| Platforms (2) |
| GPL10999 |
Illumina Genome Analyzer IIx (Homo sapiens) |
| GPL11154 |
Illumina HiSeq 2000 (Homo sapiens) |
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| Samples (3) |
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| This SubSeries is part of SuperSeries: |
| GSE83788 |
SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation |
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| Relations |
| BioProject |
PRJNA326980 |
| SRA |
SRP077354 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE83787_RAW.tar |
544.1 Mb |
(http)(custom) |
TAR (of BED, BW) |
SRA Run Selector |
| Raw data are available in SRA |
| Processed data provided as supplementary file |
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