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Series GSE83787 Query DataSets for GSE83787
Status Public on Nov 15, 2017
Title SMAD2/3 binding pattern in a breast epithelial cell line, MCF10A MII [ChIP-seq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary We report that SMAD2/3 are redirected to novel binding sites on the genome after prolonged TGFβ stimulation.
Overall design SMAD2/3 ChIP-seq analyses were performed in MCF10A MII cells at 2 different time points after TGFβ treatment.
Contributor(s) Morikawa M, Sundqvist A, Vasalaki E, Koinuma D, Aburatani H, Miyazono K, van Dam H, ten Dijke P
Citation(s) 29186616
Submission date Jun 27, 2016
Last update date May 15, 2019
Contact name Masato Morikawa
Phone +81-3-3964-1211
Organization name Teikyo University
Department Advanced Comprehensive Research Organization
Street address 2-21-1 Kaga, Itabashi-ku
City Tokyo
ZIP/Postal code 173-0003
Country Japan
Platforms (2)
GPL10999 Illumina Genome Analyzer IIx (Homo sapiens)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (3)
GSM2218835 SMAD2/3, MCF10A MII, TGFβ 1.5h_ChIP
GSM2218836 SMAD2/3, MCF10A MII, TGFβ 16h_ChIP
GSM2218837 input DNA, MCF10A MII
This SubSeries is part of SuperSeries:
GSE83788 SMAD2/3 are redirected to novel sites in MCF10A MII after prolonged TGFβ stimulation
BioProject PRJNA326980
SRA SRP077354

Download family Format
SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE83787_RAW.tar 544.1 Mb (http)(custom) TAR (of BED, BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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