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Series GSE76679 Query DataSets for GSE76679
Status Public on Jul 01, 2016
Title Motor cortex after C3 lesion
Organism Rattus norvegicus
Experiment type Expression profiling by array
Summary Gene expression analysis of motor cortex after spinal C3 lesion
 
Overall design Dorsal column wire knife lesions: Adult female Fischer 344 rats weighing 150-200 gm were used. Animals underwent a laminectomy at spinal level C3. Dorsal funiculus lesions were made in the middle of C3 using a Kopf microwire device (Kopf Instruments, Tujunga, CA). After fixation in a spinal stereotaxic unit, a small dural incision was made. The wire knife was lowered into the spinal cord to a depth of 1.1 mm ventral to the dorsal cord surface and 1.1 mm to the left of the midline. The tip of the wireknife was extruded, forming a 2.25 mm-wide arc that was raised to the dorsal surface of the cord. To ensure complete axotomy of the dorsal funiculus, spinal tissue was compressed against the microwire knife surface using a microaspiration pipette until all visible white matter was transected. Cortical microdissection: The forelimb and hindlimb motor cortex were microdisected from rat cortices: Rostral to Bregma: an area from 2.0 to 4.5 mm mediolateral and from 0 to 2 mm anterior-posterior Caudal to Bregma: an area from 2.0 to 3.5 mediolateral and from 0 to 3 mm caudal to Bregma. Only the inferior half of the cortex containing layer V corticospinal motor neurons was sampled in each region.
 
Contributor(s) Tuszynski M, Blesch A
Citation(s) 26898779
Submission date Jan 08, 2016
Last update date Jul 31, 2017
Contact name Giovanni Coppola
E-mail(s) gcoppola@ucla.edu
Phone 310-794-4172
Organization name UCLA
Department Psychiatry and Neurology
Lab Neurogenetics
Street address 1524 Gonda, 695 Charles Young Drive South
City Los Angeles
State/province CA
ZIP/Postal code 90095
Country USA
 
Platforms (1)
GPL1355 [Rat230_2] Affymetrix Rat Genome 230 2.0 Array
Samples (19)
GSM2035681 CNTR_a
GSM2035682 CNTR_b
GSM2035683 CNTR_c
Relations
BioProject PRJNA308308

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Supplementary file Size Download File type/resource
GSE76679_RAW.tar 71.3 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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